private string FindOrAddDataTypeTemplate(string dataTypeName)
{
string templateName = "dataType_" + dataTypeName;
if (this.dataTypeTemplates.ContainsKey(dataTypeName))
{
return(templateName);
}
SimpleSchema.SchemaObject simpleComplexType = this.simpleSchema.ComplexTypes.SingleOrDefault(y => y.Name == dataTypeName);
bool dataTypeDefined = this.tdb.ImplementationGuideTypeDataTypes.Count(y =>
y.ImplementationGuideTypeId == this.rootTemplate.ImplementationGuideTypeId &&
y.DataTypeName == dataTypeName) > 0;
if (simpleComplexType == null || !dataTypeDefined)
{
return(string.Empty);
}
XmlElement dataTypeTemplate = TransformHelper.CreateXslTemplate(this.transformDoc, templateName, string.Empty);
dataTypeTemplate.AppendChild(
TransformHelper.CreateXsltTemplateParam(this.transformDoc, "instance"));
CompleteDataTypeTemplate(dataTypeTemplate, simpleComplexType, "$instance");
this.dataTypeTemplates.Add(dataTypeName, dataTypeTemplate);
return(templateName);
}
public string GetConstraintDataType(DB.TemplateConstraint aConstraint, string aConstraintXpath)
{
var templateType = aConstraint.Template.TemplateType;
string context = !string.IsNullOrEmpty(aConstraint.Template.PrimaryContextType) ?
aConstraint.Template.PrimaryContextType : templateType.RootContextType;
var schema = SimplifiedSchemaContext.GetSimplifiedSchema(HttpContext.Current.Application, templateType.ImplementationGuideType);
schema = schema.GetSchemaFromContext(context);
SimpleSchema.SchemaObject lSchemaObject = schema.FindFromPath(aConstraintXpath);
return(lSchemaObject.DataType);
}
public void FindFromTypeTest()
{
string type = "IVL_TS";
SimpleSchema.SchemaObject actual = this.cdaSchema.FindFromType(type);
Assert.IsTrue(actual.Children.Exists(y => y.Name == "nullFlavor" && y.IsAttribute), "Could not find @nullFlavor attribute on IVL_TS");
Assert.IsTrue(actual.Children.Exists(y => y.Name == "value" && y.IsAttribute), "Could not find @value attribute on IVL_TS");
SimpleSchema.SchemaObject lowSchemaObject = actual.Children.SingleOrDefault(y => y.Name == "low" && !y.IsAttribute);
Assert.IsNotNull(lowSchemaObject, "Could not find <low> within IVL_TS");
Assert.IsTrue(lowSchemaObject.Children.Exists(y => y.Name == "nullFlavor" && y.IsAttribute), "Could now find low/@nullFlavor within IVL_TS");
Assert.IsTrue(lowSchemaObject.Children.Exists(y => y.Name == "value" && y.IsAttribute), "Could now find low/@value within IVL_TS");
}
public void FindFromPathTest()
{
SimpleSchema.SchemaObject documentObj = this.cdaSchema.FindFromPath("ClinicalDocument[ClinicalDocument]");
Assert.IsNotNull(documentObj, "FindFromPath should have returned a ClinicalDocument schema object.");
Assert.AreNotEqual(0, documentObj.Children.Count, "Expected the ClinicalDocument schema object to have children.");
SimpleSchema.SchemaObject idObj = this.cdaSchema.FindFromPath("ClinicalDocument[ClinicalDocument]/id[II]");
Assert.IsNotNull(idObj, "FindFromPath should have returned an id schema object.");
Assert.IsFalse(idObj.IsAttribute, "id schema object should not be an attribute.");
// Should be able to find without specifying the types for each level
SimpleSchema.SchemaObject rootObj = this.cdaSchema.FindFromPath("ClinicalDocument/id/@root");
Assert.IsNotNull(rootObj, "FindFromPath should have returned a root schemaobject.");
Assert.IsTrue(rootObj.IsAttribute, "Expected FindFromPath to return an attribute for @root.");
// Should be able to find WITH specifying the types for each level
rootObj = this.cdaSchema.FindFromPath("ClinicalDocument[ClinicalDocument]/id[II]/@root[uid]");
Assert.IsNotNull(rootObj);
Assert.IsTrue(rootObj.IsAttribute, "Expected FindFromPath to return an attribute for @root.");
SimpleSchema.SchemaObject invalidObj = this.cdaSchema.FindFromPath("ClinicalDocument[ClinicalDocument]/test[test]");
Assert.IsNull(invalidObj, "Expected not to find an element.");
}
public void FindFromTypeTest()
{
string type = "IVL_TS";
SimpleSchema.SchemaObject actual = this.cdaSchema.FindFromType(type);
Assert.IsTrue(actual.Children.Exists(y => y.Name == "nullFlavor" && y.IsAttribute), "Could not find @nullFlavor attribute on IVL_TS");
Assert.IsTrue(actual.Children.Exists(y => y.Name == "value" && y.IsAttribute), "Could not find @value attribute on IVL_TS");
/* TODO: Schema Choice support temporarily removed from non-FHIR schemas
* var choiceSchemaObject = actual.Children.SingleOrDefault(y => y.Name == "choice" && y.IsChoice);
* Assert.IsNotNull(choiceSchemaObject, "Expected to find a choice");
*
* SimpleSchema.SchemaObject lowSchemaObject = choiceSchemaObject.Children.SingleOrDefault(y => y.Name == "low" && !y.IsAttribute);
* Assert.IsNotNull(lowSchemaObject, "Could not find <low> within IVL_TS");
* Assert.IsTrue(lowSchemaObject.Children.Exists(y => y.Name == "nullFlavor" && y.IsAttribute), "Could now find low/@nullFlavor within IVL_TS");
* Assert.IsTrue(lowSchemaObject.Children.Exists(y => y.Name == "value" && y.IsAttribute), "Could now find low/@value within IVL_TS");
*/
SimpleSchema.SchemaObject lowSchemaObject = actual.Children.SingleOrDefault(y => y.Name == "low" && !y.IsAttribute);
Assert.IsNotNull(lowSchemaObject, "Could not find <low> within IVL_TS");
Assert.IsTrue(lowSchemaObject.Children.Exists(y => y.Name == "nullFlavor" && y.IsAttribute), "Could now find low/@nullFlavor within IVL_TS");
Assert.IsTrue(lowSchemaObject.Children.Exists(y => y.Name == "value" && y.IsAttribute), "Could now find low/@value within IVL_TS");
}
private void CompleteDataTypeTemplate(XmlElement parent, SimpleSchema.SchemaObject simpleObject, string currentXpath)
{
foreach (SimpleSchema.SchemaObject cChildObject in simpleObject.Children)
{
if (cChildObject.Type == SimpleSchema.ObjectTypes.Attribute)
{
string cAttributeName = Helper.NormalizeName(cChildObject.Name);
string cAttributeXpath = !string.IsNullOrEmpty(currentXpath) ? currentXpath + "/@" + cAttributeName : "@" + cAttributeName;
XmlElement attributeIfEle = TransformHelper.CreateXsltIf(this.transformDoc, cAttributeXpath);
attributeIfEle.AppendChild(
TransformHelper.CreateXsltAttributeWithValueOf(this.transformDoc, cAttributeName, cAttributeXpath));
parent.AppendChild(attributeIfEle);
}
else if (cChildObject.Type == SimpleSchema.ObjectTypes.Element)
{
string cChildXpath = !string.IsNullOrEmpty(currentXpath) ? currentXpath + "/" + cChildObject.Name : cChildObject.Name;
XmlElement newForeachEle = TransformHelper.CreateXsltForEach(this.transformDoc, cChildXpath);
XmlElement newChildElement = TransformHelper.CreateXsltElement(this.transformDoc, cChildObject.Name);
CompleteDataTypeTemplate(newChildElement, cChildObject, string.Empty);
newForeachEle.AppendChild(newChildElement);
parent.AppendChild(newForeachEle);
}
}
if (simpleObject.Mixed)
{
string textXpath = !string.IsNullOrEmpty(currentXpath) ? currentXpath + "/text()" : "text()";
XmlElement textValue = TransformHelper.CreateXsltValueOf(this.transformDoc, textXpath);
parent.AppendChild(textValue);
}
}
public StructureDefinition Convert(Template template, SimpleSchema schema, SummaryType?summaryType = null)
{
var fhirStructureDef = new fhir_stu3.Hl7.Fhir.Model.StructureDefinition()
{
Id = template.FhirId(),
Name = template.Name,
Description = template.Description != null ? new Markdown(template.Description.RemoveInvalidUtf8Characters()) : null,
Kind = template.PrimaryContextType == "Extension" ? StructureDefinition.StructureDefinitionKind.ComplexType : StructureDefinition.StructureDefinitionKind.Resource,
Url = template.FhirUrl(),
Type = template.TemplateType.RootContextType,
Context = new List <string> {
template.PrimaryContextType
},
ContextType = StructureDefinition.ExtensionContext.Resource,
Abstract = false,
Derivation = StructureDefinition.TypeDerivationRule.Constraint
};
// If this is an extension, determine what uses the extension and list them in the
// "context" field so that the extension knows where it can be used.
foreach (var extension in template.Extensions)
{
var fhirExtension = Convert(extension);
if (fhirExtension != null)
{
fhirStructureDef.Extension.Add(fhirExtension);
}
}
// Status
if (template.Status == null || template.Status.IsDraft || template.Status.IsBallot)
{
fhirStructureDef.Status = PublicationStatus.Draft;
}
else if (template.Status.IsPublished)
{
fhirStructureDef.Status = PublicationStatus.Active;
}
else if (template.Status.IsDraft)
{
fhirStructureDef.Status = PublicationStatus.Retired;
}
// Publisher and Contact
if (template.Author != null)
{
if (!string.IsNullOrEmpty(template.Author.ExternalOrganizationName))
{
fhirStructureDef.Publisher = template.Author.ExternalOrganizationName;
}
var newContact = new ContactDetail();
newContact.Name = string.Format("{0} {1}", template.Author.FirstName, template.Author.LastName);
newContact.Telecom.Add(new ContactPoint()
{
Value = template.Author.Phone,
Use = ContactPoint.ContactPointUse.Work,
System = ContactPoint.ContactPointSystem.Phone
});
newContact.Telecom.Add(new ContactPoint()
{
Value = template.Author.Email,
Use = ContactPoint.ContactPointUse.Work,
System = ContactPoint.ContactPointSystem.Email
});
fhirStructureDef.Contact.Add(newContact);
}
// Base profile
if (template.ImpliedTemplate != null)
{
fhirStructureDef.BaseDefinitionElement = new FhirUri(template.ImpliedTemplate.FhirUrl());
}
else
{
fhirStructureDef.BaseDefinitionElement = new FhirUri(string.Format("http://hl7.org/fhir/StructureDefinition/{0}", template.TemplateType.RootContextType));
}
// Constraints
if (summaryType == null || summaryType == SummaryType.Data)
{
var differential = new StructureDefinition.DifferentialComponent();
fhirStructureDef.Differential = differential;
// Add base element for resource
var rootElement = new ElementDefinition();
rootElement.Path = template.PrimaryContextType;
rootElement.ElementId = template.PrimaryContextType;
differential.Element.Add(rootElement);
var rootConstraints = template.ChildConstraints.Where(y => y.ParentConstraint == null).OrderBy(y => y.Order);
foreach (var constraint in rootConstraints)
{
SimpleSchema.SchemaObject schemaObject = null;
if (schema != null)
{
schemaObject = schema.Children.SingleOrDefault(y => y.Name == constraint.Context);
}
CreateElementDefinition(fhirStructureDef, constraint, schemaObject);
}
// Slices
var slices = template.ChildConstraints.Where(y => y.IsBranch);
var sliceGroups = slices.GroupBy(y => y.GetElementPath(template.TemplateType.RootContextType));
int currentSliceGroupCount = 2;
// Adds an element that contains "slicing" information for the branch(es)
foreach (var sliceGroup in sliceGroups)
{
ElementDefinition newElementDef = new ElementDefinition();
//newElementDef.ElementId = string.Format("{0}-{1}", template.Id, currentSliceGroupCount.ToString("00"));
newElementDef.Path = sliceGroup.Key;
newElementDef.ElementId = sliceGroup.First().GetElementPath(template.PrimaryContextType);
foreach (var branchConstraint in sliceGroup)
{
var igSettings = GetIGSettings(branchConstraint);
var constraintFormatter = FormattedConstraintFactory.NewFormattedConstraint(this.tdb, igSettings, this.igTypePlugin, branchConstraint);
var branchIdentifiers = branchConstraint.ChildConstraints.Where(y => y.IsBranchIdentifier);
newElementDef.Definition = constraintFormatter.GetPlainText(false, false, false);
newElementDef.Slicing = new ElementDefinition.SlicingComponent()
{
Rules = template.IsOpen ? ElementDefinition.SlicingRules.Open : ElementDefinition.SlicingRules.Closed
};
if (branchIdentifiers.Count() > 0)
{
newElementDef.Slicing.Discriminator = (from bi in branchIdentifiers
select new ElementDefinition.DiscriminatorComponent()
{
Type = ElementDefinition.DiscriminatorType.Value,
Path = bi.GetElementPath(null, branchConstraint)
}).ToList();
}
else if (branchConstraint.Context == "extension")
{
newElementDef.Slicing.Discriminator.Add(new ElementDefinition.DiscriminatorComponent()
{
Type = ElementDefinition.DiscriminatorType.Value,
Path = "url"
});
}
else // If no discriminators are specified, assume the child SHALL constraints are discriminators
{
var discriminatorConstraints = branchConstraint.ChildConstraints.Where(y => y.Conformance == "SHALL");
var singleValueDiscriminators = discriminatorConstraints.Where(y => !string.IsNullOrEmpty(y.Value));
// If there are constraints that have specific single-value bindings, prefer those
if (singleValueDiscriminators.Count() > 0 && singleValueDiscriminators.Count() != discriminatorConstraints.Count())
{
discriminatorConstraints = singleValueDiscriminators;
}
newElementDef.Slicing.Discriminator = (from d in discriminatorConstraints
select new ElementDefinition.DiscriminatorComponent()
{
Type = ElementDefinition.DiscriminatorType.Value,
Path = d.GetElementPath(template.PrimaryContextType, branchConstraint)
}).ToList();
}
}
// Find where to insert the slice in the element list
var firstElement = fhirStructureDef.Differential.Element.First(y => y.Path == sliceGroup.Key);
var firstElementIndex = fhirStructureDef.Differential.Element.IndexOf(firstElement);
differential.Element.Insert(firstElementIndex, newElementDef);
currentSliceGroupCount++;
}
}
return(fhirStructureDef);
}
public void CreateElementDefinition(
StructureDefinition strucDef,
TemplateConstraint constraint,
SimpleSchema.SchemaObject schemaObject)
{
if (constraint.IsPrimitive) // Skip primitives (for now, at least)
{
return;
}
string sliceName = constraint.GetSliceName();
string elementPath = constraint.GetElementPath(strucDef.Type != null ? strucDef.Type.ToString() : null);
var igSettings = GetIGSettings(constraint);
var constraintFormatter = FormattedConstraintFactory.NewFormattedConstraint(this.tdb, igSettings, this.igTypePlugin, constraint);
string definition = constraintFormatter.GetPlainText(false, false, false);
if (definition == null)
{
definition = string.Empty;
}
ElementDefinition newElementDef = new ElementDefinition()
{
Short = !string.IsNullOrEmpty(constraint.Label) ? constraint.Label : constraint.Context,
Label = !string.IsNullOrEmpty(constraint.Label) ? constraint.Label : null,
Comment = !string.IsNullOrEmpty(constraint.Notes) ? constraint.Notes : null,
Path = elementPath,
SliceName = sliceName,
Definition = definition,
ElementId = constraint.GetElementId()
};
if (constraint.IsChoice)
{
newElementDef.Slicing = new ElementDefinition.SlicingComponent();
newElementDef.Slicing.Discriminator.Add(new ElementDefinition.DiscriminatorComponent()
{
Type = ElementDefinition.DiscriminatorType.Type,
Path = "$this"
});
newElementDef.Slicing.Rules = ElementDefinition.SlicingRules.Open;
}
else if (constraint.Parent != null && constraint.Parent.IsChoice)
{
newElementDef.SliceName = constraint.Context;
}
// Cardinality
if (!string.IsNullOrEmpty(constraint.Cardinality))
{
newElementDef.Min = constraint.CardinalityType.Left;
newElementDef.Max = constraint.CardinalityType.Right == Cardinality.MANY ? "*" : constraint.CardinalityType.Right.ToString();
}
// Binding
string valueConformance = string.IsNullOrEmpty(constraint.ValueConformance) ? constraint.Conformance : constraint.ValueConformance;
bool hasBinding = constraint.References.Any(y => y.ReferenceType == ConstraintReferenceTypes.Template);
if (constraint.ValueSet != null && valueConformance.IndexOf("NOT") < 0)
{
hasBinding = true;
newElementDef.Binding = new ElementDefinition.ElementDefinitionBindingComponent()
{
ValueSet = new ResourceReference()
{
Reference = constraint.ValueSet.GetIdentifier(ValueSetIdentifierTypes.HTTP),
Display = constraint.ValueSet.Name
}
};
if (valueConformance == "SHALL")
{
newElementDef.Binding.Strength = BindingStrength.Required;
}
else if (valueConformance == "SHOULD")
{
newElementDef.Binding.Strength = BindingStrength.Preferred;
}
else if (valueConformance == "MAY")
{
newElementDef.Binding.Strength = BindingStrength.Example;
}
}
// Single-Value Binding
if (schemaObject != null && (!string.IsNullOrEmpty(constraint.Value) || !string.IsNullOrEmpty(constraint.DisplayName)))
{
Element elementBinding = null;
hasBinding = true;
switch (schemaObject.DataType)
{
case "CodeableConcept":
var codableConceptBinding = new CodeableConcept();
var coding = new Coding();
codableConceptBinding.Coding.Add(coding);
if (!string.IsNullOrEmpty(constraint.Value))
{
coding.Code = constraint.Value;
}
if (constraint.CodeSystem != null)
{
coding.System = constraint.CodeSystem.Oid;
}
if (!string.IsNullOrEmpty(constraint.DisplayName))
{
coding.Display = constraint.DisplayName;
}
elementBinding = codableConceptBinding;
break;
case "Coding":
var codingBinding = new Coding();
if (!string.IsNullOrEmpty(constraint.Value))
{
codingBinding.Code = constraint.Value;
}
if (constraint.CodeSystem != null)
{
codingBinding.System = constraint.CodeSystem.Oid;
}
if (!string.IsNullOrEmpty(constraint.DisplayName))
{
codingBinding.Display = constraint.DisplayName;
}
elementBinding = codingBinding;
break;
case "code":
var codeBinding = new Code();
codeBinding.Value = !string.IsNullOrEmpty(constraint.Value) ? constraint.Value : constraint.DisplayName;
elementBinding = codeBinding;
break;
default:
var stringBinding = new FhirString();
stringBinding.Value = !string.IsNullOrEmpty(constraint.Value) ? constraint.Value : constraint.DisplayName;
elementBinding = stringBinding;
break;
}
if (constraint.IsFixed)
{
newElementDef.Fixed = elementBinding;
}
else
{
newElementDef.Pattern = elementBinding;
}
}
// Add the type of the element when bound to a value set
if (hasBinding && schemaObject != null && !string.IsNullOrEmpty(schemaObject.DataType))
{
StructureDefinition profile = GetBaseProfile(constraint.Template);
newElementDef.Type = GetProfileDataTypes(profile, constraint);
var containedTemplates = (from tcr in constraint.References
join t in this.tdb.Templates on tcr.ReferenceIdentifier equals t.Oid
where tcr.ReferenceType == ConstraintReferenceTypes.Template
select new { Identifier = t.Oid, t.PrimaryContextType });
// If there is a contained template/profile, make sure it supports a "Reference" type, and then output the profile identifier in the type
if (containedTemplates.Count() > 0 && newElementDef.Type.Exists(y => y.Code == "Reference" || y.Code == "Extension"))
{
if (!string.IsNullOrEmpty(newElementDef.SliceName))
{
var foundMatchingElement = strucDef.Differential.Element.SingleOrDefault(y => y.Path == newElementDef.Path && y.SliceName == newElementDef.SliceName);
if (foundMatchingElement != null)
{
foundMatchingElement.Definition += " " + definition;
newElementDef = foundMatchingElement;
}
}
var containedTypes = new List <ElementDefinition.TypeRefComponent>();
foreach (var containedTemplate in containedTemplates)
{
bool isExtension = containedTemplate.PrimaryContextType == "Extension" && newElementDef.Type.Exists(y => y.Code == "Extension");
containedTypes.Add(new ElementDefinition.TypeRefComponent()
{
Code = isExtension ? "Extension" : "Reference",
Profile = isExtension ? containedTemplate.Identifier : null,
TargetProfile = !isExtension ? containedTemplate.Identifier : null
});
}
newElementDef.Type = containedTypes;
}
}
// Add the element to the list if it's new
if (!strucDef.Differential.Element.Contains(newElementDef))
{
strucDef.Differential.Element.Add(newElementDef);
}
// Children
foreach (var childConstraint in constraint.ChildConstraints.OrderBy(y => y.Order))
{
var childSchemaObject = schemaObject != null?schemaObject.Children.SingleOrDefault(y => y.Name == childConstraint.Context) : null;
CreateElementDefinition(strucDef, childConstraint, childSchemaObject);
}
}
private void AddTemplateTableConstraint(Template template, IEnumerable <ConstraintReference> templateReferences, Table table, TemplateConstraint constraint, int level, bool includeCategoryHeader, SimpleSchema.SchemaObject schemaObject)
{
// Skip the child constraints if this is a choice there is only one child constraint. This constraint
// adopts the constraint narrative of the child constraint when there is only one option.
if (constraint.IsChoice && constraint.ChildConstraints.Count == 1)
{
constraint = constraint.ChildConstraints.First();
}
if (constraint.IsPrimitive != true && !string.IsNullOrEmpty(constraint.Context))
{
string xpath = constraint.Context;
string cardinality = constraint.Cardinality;
string conformance = constraint.Conformance;
string dataType = constraint.DataType;
string fixedValue = string.Empty;
string fixedValueLink = string.Empty;
string levelSpacing = string.Empty;
string confNumber = template.OwningImplementationGuideId + "-" + constraint.Number.ToString();
var isFhir = constraint.Template.ImplementationGuideType.SchemaURI == ImplementationGuideType.FHIR_NS;
// Check if we're dealing with a FHIR constraint
if (isFhir && schemaObject != null)
{
dataType = schemaObject.DataType;
}
if (constraint.ValueSet != null)
{
string valueSetIdentifier = constraint.ValueSet.GetIdentifier(igTypePlugin);
fixedValue = string.Format("{0} ({1})", valueSetIdentifier, constraint.ValueSet.Name);
}
else if (constraint.CodeSystem != null)
{
fixedValue = string.Format("{0} ({1})", constraint.CodeSystem.Oid, constraint.CodeSystem.Name);
}
var constraintReferences = templateReferences.Where(y => y.TemplateConstraintId == constraint.Id);
if (!string.IsNullOrEmpty(constraint.Value))
{
if (!string.IsNullOrEmpty(fixedValue))
{
fixedValue += " = " + constraint.Value;
}
else
{
fixedValue = constraint.Value;
}
}
else if (constraintReferences.Count() > 0)
{
var containedTemplateValues = constraintReferences.Select(y => string.Format("{0} (identifier: {1}", y.Name, y.Identifier));
fixedValue = string.Join(" or ", containedTemplateValues);
var firstConstraintReference = constraintReferences.First();
if (constraintReferences.Count() == 1 && firstConstraintReference.IncludedInIG)
{
fixedValueLink = firstConstraintReference.Bookmark;
}
}
for (int i = 1; i <= (level); i++) // One tab for each level
{
levelSpacing += "\t";
}
TableRow entryRow = new TableRow();
if (includeCategoryHeader)
{
AppendTextCell(entryRow, constraint.Category);
}
AppendTextCell(entryRow, levelSpacing + xpath);
AppendTextCell(entryRow, cardinality);
AppendTextCell(entryRow, conformance);
AppendTextCell(entryRow, dataType);
AppendHyperlinkCell(entryRow, confNumber, "C_" + confNumber);
if (!string.IsNullOrEmpty(fixedValueLink))
{
AppendHyperlinkCell(entryRow, fixedValue, fixedValueLink);
}
else
{
AppendTextCell(entryRow, fixedValue);
}
table.AppendChild(entryRow);
}
// Recursively handle child constraints
var childConstraints = template.ChildConstraints
.Where(y => y.ParentConstraintId == constraint.Id)
.OrderBy(y => y.Order);
foreach (TemplateConstraint cConstraint in childConstraints)
{
if (this.HasSelectedCategories && !string.IsNullOrEmpty(cConstraint.Category) && !this.selectedCategories.Contains(cConstraint.Category))
{
continue;
}
var nextSchemaObject = schemaObject != null?
schemaObject.Children.SingleOrDefault(y => y.Name == cConstraint.Context) :
null;
this.AddTemplateTableConstraint(template, templateReferences, table, cConstraint, level + 1, includeCategoryHeader, nextSchemaObject);
}
}
public void CreateElementDefinition(
StructureDefinition strucDef,
TemplateConstraint constraint,
SimpleSchema.SchemaObject schemaObject,
string sliceName = null)
{
if (constraint.IsPrimitive) // Skip primitives (for now, at least)
{
return;
}
string newSliceName = null;
if (constraint.IsBranch)
{
newSliceName = string.Format("{0}_slice_pos{1}", constraint.Context, constraint.Order);
}
var igSettings = GetIGSettings(constraint);
var constraintFormatter = FormattedConstraintFactory.NewFormattedConstraint(this.tdb, igSettings, this.igTypePlugin, constraint);
ElementDefinition newElementDef = new ElementDefinition()
{
Short = !string.IsNullOrEmpty(constraint.Label) ? constraint.Label : constraint.Context,
Label = !string.IsNullOrEmpty(constraint.Label) ? constraint.Label : null,
Comments = !string.IsNullOrEmpty(constraint.Notes) ? constraint.Notes : null,
Path = constraint.GetElementPath(strucDef.ConstrainedType),
Name = constraint.IsBranch ? newSliceName : sliceName,
Definition = constraintFormatter.GetPlainText(false, false, false)
};
// Cardinality
if (!string.IsNullOrEmpty(constraint.Cardinality))
{
newElementDef.Min = constraint.CardinalityType.Left;
newElementDef.Max = constraint.CardinalityType.Right == Cardinality.MANY ? "*" : constraint.CardinalityType.Right.ToString();
}
// Binding
string valueConformance = string.IsNullOrEmpty(constraint.ValueConformance) ? constraint.Conformance : constraint.ValueConformance;
bool hasBinding = constraint.References.Any(y => y.ReferenceType == ConstraintReferenceTypes.Template);
if (constraint.ValueSet != null && valueConformance.IndexOf("NOT") < 0)
{
hasBinding = true;
newElementDef.Binding = new ElementDefinition.ElementDefinitionBindingComponent()
{
ValueSet = new ResourceReference()
{
Reference = string.Format("ValueSet/{0}", constraint.ValueSet.Id),
Display = constraint.ValueSet.Name
}
};
if (valueConformance == "SHALL")
{
newElementDef.Binding.Strength = BindingStrength.Required;
}
else if (valueConformance == "SHOULD")
{
newElementDef.Binding.Strength = BindingStrength.Preferred;
}
else if (valueConformance == "MAY")
{
newElementDef.Binding.Strength = BindingStrength.Example;
}
}
// Single-Value Binding
if (schemaObject != null && (!string.IsNullOrEmpty(constraint.Value) || !string.IsNullOrEmpty(constraint.DisplayName)))
{
hasBinding = true;
switch (schemaObject.DataType)
{
case "CodeableConcept":
var fixedCodeableConcept = new CodeableConcept();
var coding = new Coding();
fixedCodeableConcept.Coding.Add(coding);
if (!string.IsNullOrEmpty(constraint.Value))
{
coding.Code = constraint.Value;
}
if (constraint.CodeSystem != null)
{
coding.System = constraint.CodeSystem.Oid;
}
if (!string.IsNullOrEmpty(constraint.DisplayName))
{
coding.Display = constraint.DisplayName;
}
newElementDef.Fixed = fixedCodeableConcept;
break;
case "Coding":
var fixedCoding = new Coding();
if (!string.IsNullOrEmpty(constraint.Value))
{
fixedCoding.Code = constraint.Value;
}
if (constraint.CodeSystem != null)
{
fixedCoding.System = constraint.CodeSystem.Oid;
}
if (!string.IsNullOrEmpty(constraint.DisplayName))
{
fixedCoding.Display = constraint.DisplayName;
}
newElementDef.Fixed = fixedCoding;
break;
case "code":
var fixedCode = new Code();
fixedCode.Value = !string.IsNullOrEmpty(constraint.Value) ? constraint.Value : constraint.DisplayName;
newElementDef.Fixed = fixedCode;
break;
default:
var fixedString = new FhirString();
fixedString.Value = !string.IsNullOrEmpty(constraint.Value) ? constraint.Value : constraint.DisplayName;
newElementDef.Fixed = fixedString;
break;
}
}
// Add the type of the element when bound to a value set
if (hasBinding && schemaObject != null && !string.IsNullOrEmpty(schemaObject.DataType))
{
StructureDefinition profile = GetBaseProfile(constraint.Template);
newElementDef.Type = GetProfileDataTypes(profile, constraint);
var containedTemplates = (from tcr in constraint.References
join t in this.tdb.Templates on tcr.ReferenceIdentifier equals t.Oid
where tcr.ReferenceType == ConstraintReferenceTypes.Template
select new { Identifier = t.Oid, t.PrimaryContextType });
// If there is a contained template/profile, make sure it supports a "Reference" type, and then output the profile identifier in the type
if (containedTemplates.Count() > 0 && newElementDef.Type.Exists(y => y.Code == "Reference" || y.Code == "Extension"))
{
var containedTypes = new List <ElementDefinition.TypeRefComponent>();
foreach (var containedTemplate in containedTemplates)
{
bool isExtension = containedTemplate.PrimaryContextType == "Extension" && newElementDef.Type.Exists(y => y.Code == "Extension");
containedTypes.Add(new ElementDefinition.TypeRefComponent()
{
Code = isExtension ? "Extension" : "Reference",
Profile = new List <string>(new string[] { containedTemplate.Identifier })
});
}
newElementDef.Type = containedTypes;
}
}
// Add the element to the list
strucDef.Differential.Element.Add(newElementDef);
// Children
foreach (var childConstraint in constraint.ChildConstraints.OrderBy(y => y.Order))
{
var childSchemaObject = schemaObject != null?schemaObject.Children.SingleOrDefault(y => y.Name == childConstraint.Context) : null;
CreateElementDefinition(strucDef, childConstraint, childSchemaObject, newSliceName);
}
}
/// <summary>
/// Perform validations on a single constraint.
/// </summary>
/// <param name="results">The list of errors that should be added to when a constraint has an error matching the schema</param>
/// <param name="schemaObjects">The list of sibling-level schema objects that the constraint should be compared to</param>
/// <param name="currentConstraint">The current constraint to match against the schema</param>
public void ValidateTemplateConstraint(
Template template,
XPathNavigator xpathNavigator,
List <ValidationResult> results,
SimpleSchema schema,
List <SimpleSchema.SchemaObject> schemaObjects,
TemplateConstraint currentConstraint,
IEnumerable <Template> allContainedTemplates)
{
List <TemplateConstraint> childConstraints = currentConstraint.ChildConstraints.ToList();
if (!string.IsNullOrEmpty(currentConstraint.Schematron))
{
try
{
XPathExpression expr = xpathNavigator.Compile(currentConstraint.Schematron);
}
catch (XPathException ex)
{
results.Add(ValidationResult.CreateResult(template.Id, template.Name, currentConstraint.Number.Value, ValidationLevels.Error, "Custom schematron is not valid: " + ex.Message));
}
}
if (currentConstraint.IsPrimitive && string.IsNullOrEmpty(currentConstraint.PrimitiveText))
{
results.Add(ValidationResult.CreateResult(template.Id, template.Name, currentConstraint.Number.Value, ValidationLevels.Error, "Primitive does not have any narrative text."));
return;
}
else if (!string.IsNullOrEmpty(currentConstraint.Context))
{
string context = currentConstraint.Context;
bool isAttribute = context.StartsWith("@");
// If it is an attribute, then we need to remove the @ from the context
if (isAttribute)
{
context = context.Substring(1);
}
SimpleSchema.SchemaObject foundSchemaObject = schemaObjects.SingleOrDefault(y => y.Name.ToLower() == context.ToLower() && y.IsAttribute == isAttribute);
// Verify that the template (if specified) matches the datatype of the constraints
if (foundSchemaObject != null)
{
var templates = allContainedTemplates != null ? allContainedTemplates : this.tdb.Templates.AsEnumerable();
var containedTemplates = (from tcr in currentConstraint.References
join t in templates on tcr.ReferenceIdentifier equals t.Oid
where tcr.ReferenceType == ConstraintReferenceTypes.Template
select t);
string constraintDataType = !string.IsNullOrEmpty(currentConstraint.DataType) ? currentConstraint.DataType : foundSchemaObject.DataType;
foreach (var containedTemplate in containedTemplates)
{
string containedTemplateDataType = containedTemplate.PrimaryContextType;
bool isFhirResourceReference = schema.Schema.TargetNamespace == "http://hl7.org/fhir" && (constraintDataType == "ResourceReference" || constraintDataType == "Reference");
if (!isFhirResourceReference && containedTemplateDataType.ToLower() != constraintDataType.ToLower())
{
results.Add(ValidationResult.CreateResult(
template.Id,
template.Name,
currentConstraint.Number.Value,
ValidationLevels.Error,
"Contained template \"{0}\" has a type of \"{1}\" which does not match the containing element \"{2}\"",
containedTemplate.Oid,
containedTemplateDataType,
constraintDataType));
}
}
}
// Verify that branched elements have at least one identifier
if (currentConstraint.IsBranch && childConstraints.Count(y => y.IsBranchIdentifier) == 0)
{
results.Add(ValidationResult.CreateResult(template.Id, template.Name, currentConstraint.Number.Value, ValidationLevels.Warning, "Branched constraint \"{0}\" does not have any identifiers associated with it.", currentConstraint.GetXpath()));
}
// Verify that a schema-object can be matched to this constraint
if (foundSchemaObject == null)
{
results.Add(ValidationResult.CreateResult(template.Id, template.Name, currentConstraint.Number.Value, ValidationLevels.Error, "Constraint has context of \"{0}\" which is not found in the schema.", currentConstraint.GetXpath()));
return; // Do not process child constraints when the parent is not matched to the schema
}
else if (foundSchemaObject.Cardinality != null && currentConstraint.Cardinality != null)
{
var siblings = currentConstraint.ParentConstraint != null ? currentConstraint.ParentConstraint.ChildConstraints : template.ChildConstraints.Where(y => y.ParentConstraint == null);
var isDuplicate = siblings.Count(y => y.Context == currentConstraint.Context) > 1;
// Warn when a constraint that is associated with the schema that has multiple cardinality but is not branched
if (template.IsOpen &&
!foundSchemaObject.Cardinality.EndsWith("..1") &&
!foundSchemaObject.Cardinality.EndsWith("..0") &&
!currentConstraint.IsBranch &&
isDuplicate)
{
var error = ValidationResult.CreateResult(template.Id, template.Name, currentConstraint.Number.Value, ValidationLevels.Warning, "Schema allows multiple for \"{0}\" but the constraint is not branched. Consider branching this constraint.", currentConstraint.GetXpath());
results.Add(error);
}
if (foundSchemaObject.Cardinality.EndsWith("..1") && !(currentConstraint.Cardinality.EndsWith("..0") || currentConstraint.Cardinality.EndsWith("..1")))
{
var error = ValidationResult.CreateResult(template.Id, template.Name, currentConstraint.Number.Value, ValidationLevels.Error, "The cardinality for the element is loosened in the constraint from the underlying schema.");
results.Add(error);
}
}
List <SimpleSchema.SchemaObject> childSchemaObjects = foundSchemaObject.Children;
// If a data-type is specified, then we should find the data-type within the schema, since it is likely different than what
// is specified by default.
if (!string.IsNullOrEmpty(currentConstraint.DataType))
{
SimpleSchema.SchemaObject foundSchemaTypeObject = schema.FindFromType(currentConstraint.DataType);
if (foundSchemaTypeObject != null)
{
childSchemaObjects = foundSchemaTypeObject.Children;
}
}
childConstraints.ForEach(y => ValidateTemplateConstraint(template, xpathNavigator, results, schema, childSchemaObjects, y, allContainedTemplates));
}
}
private void AddTemplateTableConstraint(Template template, Table table, TemplateConstraint constraint, int level, bool includeCategoryHeader, SimpleSchema.SchemaObject schemaObject)
{
if (constraint.IsPrimitive != true && !string.IsNullOrEmpty(constraint.Context))
{
string xpath = constraint.Context;
string cardinality = constraint.Cardinality;
string conformance = constraint.Conformance;
string dataType = constraint.DataType;
string fixedValue = string.Empty;
string fixedValueLink = string.Empty;
string levelSpacing = string.Empty;
string confNumber = constraint.GetFormattedNumber(this.igSettings.PublishDate);
var isFhir = constraint.Template.ImplementationGuideType.SchemaURI == ImplementationGuideType.FHIR_NS;
// Check if we're dealing with a FHIR constraint
if (isFhir && schemaObject != null)
{
dataType = schemaObject.DataType;
}
if (constraint.ValueSet != null)
{
fixedValue = string.Format("{0} ({1})", constraint.ValueSet.Oid, constraint.ValueSet.Name);
}
else if (constraint.CodeSystem != null)
{
fixedValue = string.Format("{0} ({1})", constraint.CodeSystem.Oid, constraint.CodeSystem.Name);
}
if (!string.IsNullOrEmpty(constraint.Value))
{
if (!string.IsNullOrEmpty(fixedValue))
{
fixedValue += " = " + constraint.Value;
}
else
{
fixedValue = constraint.Value;
}
}
else if (constraint.ContainedTemplate != null)
{
fixedValue = string.Format("{0} (identifier: {1}", constraint.ContainedTemplate.Name, constraint.ContainedTemplate.Oid);
if (this.templates.Contains(constraint.ContainedTemplate))
{
fixedValueLink = constraint.ContainedTemplate.Bookmark;
}
}
for (int i = 1; i <= (level); i++) // One tab for each level
{
levelSpacing += "\t";
}
TableRow entryRow = new TableRow();
if (includeCategoryHeader)
{
AppendTextCell(entryRow, constraint.Category);
}
AppendTextCell(entryRow, levelSpacing + xpath);
AppendTextCell(entryRow, cardinality);
AppendTextCell(entryRow, conformance);
AppendTextCell(entryRow, dataType);
AppendHyperlinkCell(entryRow, confNumber, "C_" + confNumber);
if (!string.IsNullOrEmpty(fixedValueLink))
{
AppendHyperlinkCell(entryRow, fixedValue, fixedValueLink);
}
else
{
AppendTextCell(entryRow, fixedValue);
}
table.AppendChild(entryRow);
}
// Recursively handle child constraints
var childConstraints = template.ChildConstraints
.Where(y => y.ParentConstraintId == constraint.Id)
.OrderBy(y => y.Order);
foreach (TemplateConstraint cConstraint in childConstraints)
{
if (this.HasSelectedCategories && !string.IsNullOrEmpty(cConstraint.Category) && !this.selectedCategories.Contains(cConstraint.Category))
{
continue;
}
var nextSchemaObject = schemaObject != null?
schemaObject.Children.SingleOrDefault(y => y.Name == cConstraint.Context) :
null;
this.AddTemplateTableConstraint(template, table, cConstraint, level + 1, includeCategoryHeader, nextSchemaObject);
}
}
public void TestSimplifiedSchema_CDA()
{
SimpleSchema cdaSchema = SimpleSchema.CreateSimpleSchema(
Trifolia.Shared.Helper.GetIGSimplifiedSchemaLocation(
new ImplementationGuideType()
{
Name = Constants.IGTypeNames.CDA,
SchemaLocation = Constants.IGTypeSchemaLocations.CDA
}));
Assert.IsNotNull(cdaSchema.ComplexTypes);
Assert.AreEqual(232, cdaSchema.ComplexTypes.Count); // This number may change if the schema changes
Assert.IsNotNull(cdaSchema.Children);
Assert.AreEqual(1, cdaSchema.Children.Count);
// Test root document level
SimpleSchema.SchemaObject clinicalDocument = cdaSchema.Children.SingleOrDefault(y => y.Name == "ClinicalDocument");
Assert.IsNotNull(clinicalDocument);
Assert.AreEqual("ClinicalDocument", clinicalDocument.DataType);
Assert.AreEqual(false, clinicalDocument.Mixed);
Assert.AreEqual(31, clinicalDocument.Children.Count);
var clinicalDocumentInvalidChildNames = clinicalDocument.Children.Where(y => string.IsNullOrEmpty(y.Name) || y.Name.Length <= 1);
Assert.IsTrue(clinicalDocumentInvalidChildNames.Count() == 0);
Assert.AreEqual(SimpleSchema.ObjectTypes.Element, clinicalDocument.Type);
// Test datatype
SimpleSchema.SchemaObject typeId = clinicalDocument.Children.SingleOrDefault(y => y.Name == "typeId");
Assert.IsNotNull(typeId);
Assert.AreEqual("typeId[typeId]", typeId.ToString());
Assert.AreEqual("typeId", typeId.DataType);
Assert.AreEqual("1..1", typeId.Cardinality);
Assert.AreEqual("SHALL", typeId.Conformance);
Assert.AreEqual(false, typeId.Mixed);
Assert.AreEqual(5, typeId.Children.Count);
var typeIdInvalidNames = typeId.Children.Where(y => string.IsNullOrEmpty(y.Name) || y.Name.Length <= 1);
Assert.IsTrue(typeIdInvalidNames.Count() == 0);
Assert.AreEqual(SimpleSchema.ObjectTypes.Element, typeId.Type);
// Test attribute
SimpleSchema.SchemaObject typeIdRoot = typeId.Children.SingleOrDefault(y => y.Name == "root");
Assert.IsNotNull(typeId);
Assert.AreEqual("uid", typeIdRoot.DataType);
Assert.AreEqual("1..1", typeIdRoot.Cardinality);
Assert.AreEqual("SHALL", typeIdRoot.Conformance);
Assert.AreEqual(false, typeIdRoot.Mixed);
Assert.AreEqual(0, typeIdRoot.Children.Count);
Assert.AreEqual(SimpleSchema.ObjectTypes.Attribute, typeIdRoot.Type);
// Test many cardinality
SimpleSchema.SchemaObject recordTarget = clinicalDocument.Children.SingleOrDefault(y => y.Name == "recordTarget");
Assert.IsNotNull(recordTarget);
Assert.AreEqual("RecordTarget", recordTarget.DataType);
Assert.AreEqual("1..*", recordTarget.Cardinality);
Assert.AreEqual("SHALL", recordTarget.Conformance);
Assert.AreEqual(false, recordTarget.Mixed);
Assert.AreEqual(7, recordTarget.Children.Count);
var recordTargetInvalidNames = recordTarget.Children.Where(y => string.IsNullOrEmpty(y.Name) || y.Name.Length <= 1);
Assert.IsTrue(recordTargetInvalidNames.Count() == 0);
Assert.AreEqual(SimpleSchema.ObjectTypes.Element, recordTarget.Type);
// Test patientRole
SimpleSchema.SchemaObject patientRole = recordTarget.Children.SingleOrDefault(y => y.Name == "patientRole");
Assert.IsNotNull(patientRole);
Assert.AreEqual("PatientRole", patientRole.DataType);
Assert.AreEqual("1..1", patientRole.Cardinality);
Assert.AreEqual("SHALL", patientRole.Conformance);
Assert.AreEqual(false, patientRole.Mixed);
Assert.AreEqual(10, patientRole.Children.Count);
Assert.AreEqual(SimpleSchema.ObjectTypes.Element, patientRole.Type);
// Test conformance
SimpleSchema.SchemaObject patient = patientRole.Children.SingleOrDefault(y => y.Name == "patient");
Assert.IsNotNull(patient);
Assert.AreEqual("Patient", patient.DataType);
Assert.AreEqual("0..1", patient.Cardinality);
Assert.AreEqual("MAY", patient.Conformance);
Assert.AreEqual(false, patient.Mixed);
Assert.AreEqual(24, patient.Children.Count);
Assert.IsNotNull(patient.Children.SingleOrDefault(y => y.Name == "sdtc:raceCode"));
var patientInvalidNames = patient.Children.Where(y => string.IsNullOrEmpty(y.Name) || y.Name.Length <= 1);
Assert.IsTrue(patientInvalidNames.Count() == 0);
Assert.AreEqual(SimpleSchema.ObjectTypes.Element, patientRole.Type);
SimpleSchema.SchemaObject sdtcRaceCode = patient.Children.Single(y => y.Name == "sdtc:raceCode");
var sdtcRaceCodeInvalidNames = sdtcRaceCode.Children.Where(y => string.IsNullOrEmpty(y.Name) || y.Name.Length <= 1);
Assert.IsTrue(sdtcRaceCodeInvalidNames.Count() == 0);
// Test mixed
SimpleSchema.SchemaObject patientName = patient.Children.SingleOrDefault(y => y.Name == "name");
Assert.IsNotNull(patientName);
Assert.AreEqual("PN", patientName.DataType);
Assert.AreEqual("0..*", patientName.Cardinality);
Assert.AreEqual("MAY", patientName.Conformance);
Assert.AreEqual(true, patientName.Mixed);
Assert.AreEqual(8, patientName.Children.Count, "Expected patient to have 8 children"); // TODO: Schema Choice support temporarily removed from non-FHIR schemas
Assert.IsTrue(patientName.Children.Count(y => string.IsNullOrEmpty(y.Name) || y.Name.Length <= 1) == 0);
Assert.AreEqual(SimpleSchema.ObjectTypes.Element, patientRole.Type);
}
private void AddConstraint(XmlNode aParent, List <SimpleSchema.SchemaObject> siblingSchemaObjects, TemplateConstraint aConstraint)
{
// If the constraint is a primitive, add a comment to the sample
if (aConstraint.IsPrimitive)
{
XmlComment comment = _currentDocument.CreateComment("PRIMITIVE: " + aConstraint.PrimitiveText);
XmlNode nonAttributeParent = GetNonAttributeParent(aParent);
if (nonAttributeParent != null)
{
nonAttributeParent.AppendChild(comment);
}
}
// If the constraint is not primitive and does not have a context, add an error comment to the sample
else if (!aConstraint.IsPrimitive && string.IsNullOrEmpty(aConstraint.Context))
{
XmlComment comment =
_currentDocument.CreateComment("ERROR: Constraint " + aConstraint.Id.ToString() +
" does not have a context.");
aParent.AppendChild(comment);
}
else
{
// Splitting on / in case legacy data is exported that makes use of xpath in constraint contexts
string[] lContextSplit = aConstraint.Context.Split('/');
XmlNode lCurrentNode = aParent;
SimpleSchema.SchemaObject lSchemaObject = null;
foreach (string lCurrentContextSplit in lContextSplit)
{
bool lIsAttribute = lCurrentContextSplit.StartsWith("@");
string lStrippedContext = lCurrentContextSplit.Replace("@", "");
// Add an error comment if an attribute is a child of another attribute (ex: "@root/@extension")
if (lIsAttribute && lCurrentNode is XmlAttribute)
{
XmlComment comment =
_currentDocument.CreateComment(
"ERROR: An attribute cannot be a child of another attribute for constraint " +
aConstraint.Id.ToString());
lCurrentNode.AppendChild(comment);
break;
}
// Find the schema object associated with this constraint
if (siblingSchemaObjects != null)
{
lSchemaObject =
siblingSchemaObjects.SingleOrDefault(
y => y.Name == lStrippedContext && y.IsAttribute == lIsAttribute);
}
// If the constraint is an attribute, add an attribute to the parent
if (lIsAttribute)
{
XmlAttribute attribute = lCurrentNode.Attributes[lStrippedContext];
if (attribute == null)
{
attribute = _currentDocument.CreateAttribute(lStrippedContext);
lCurrentNode.Attributes.Append(attribute);
}
if (!string.IsNullOrEmpty(aConstraint.Value))
{
attribute.Value = aConstraint.Value;
}
else
{
attribute.Value = "XXX";
}
lCurrentNode = attribute;
}
// Otherwise, create an element and add it to the parent
else
{
XmlElement lNewContextElement = _currentDocument.CreateElement(lCurrentContextSplit);
if (lSchemaObject != null)
{
foreach (SimpleSchema.SchemaObject lCurrentSchemaAttribute in lSchemaObject.Children.Where(y => y.IsAttribute))
{
if (!lCurrentSchemaAttribute.Cardinality.StartsWith("1.."))
{
continue;
}
XmlAttribute newAttribute = _currentDocument.CreateAttribute(lCurrentSchemaAttribute.Name);
lNewContextElement.Attributes.Append(newAttribute);
if (!string.IsNullOrEmpty(lCurrentSchemaAttribute.FixedValue))
{
newAttribute.Value = lCurrentSchemaAttribute.FixedValue;
}
else if (!string.IsNullOrEmpty(lCurrentSchemaAttribute.Value))
{
newAttribute.Value = lCurrentSchemaAttribute.Value;
}
else
{
newAttribute.Value = "YYY";
}
}
if (!string.IsNullOrEmpty(aConstraint.DataType) && lSchemaObject.DataType != aConstraint.DataType)
{
XmlAttribute xsiTypeAttribute = _currentDocument.CreateAttribute("xsi", "type", "http://www.w3.org/2001/XMLSchema-instance");
xsiTypeAttribute.Value = aConstraint.DataType;
lNewContextElement.Attributes.Append(xsiTypeAttribute);
}
}
// Do not add elements to attributes
if (!(lCurrentNode is XmlAttribute))
{
lCurrentNode.AppendChild(lNewContextElement);
lCurrentNode = lNewContextElement;
}
else
{
// Add a comment to the generated sample that indicates the problem
string commentText = string.Format(
"Error: Attribute contains an element. (CONF #: {0}, context: '{1}')",
aConstraint.Id,
!string.IsNullOrEmpty(aConstraint.Context) ? aConstraint.Context : "N/A");
XmlComment comment = this._currentDocument.CreateComment(commentText);
if (lCurrentNode.ParentNode != null)
{
lCurrentNode.ParentNode.AppendChild(comment);
}
else
{
this._currentDocument.DocumentElement.AppendChild(comment);
}
}
}
if (lSchemaObject == null)
{
this.isSchemaValid = false;
}
}
List <TemplateConstraint> childConstraints = aConstraint.ChildConstraints
.OrderBy(y => y.Order)
.ToList();
childConstraints.ForEach(y => AddConstraint(lCurrentNode, lSchemaObject != null ? lSchemaObject.Children : null, y));
if (lSchemaObject != null)
{
this.AddMissingRequiredData(lCurrentNode, lSchemaObject.Children);
}
if (lCurrentNode is XmlElement)
{
foreach (XmlNode childNode in lCurrentNode.ChildNodes)
{
if (childNode is XmlElement)
{
this.igTypePlugin.FillSampleData((XmlElement)childNode);
}
}
}
}
}
private void CreateConstraints(IGSettingsManager igManager, IIGTypePlugin igTypePlugin, IEnumerable <TemplateConstraint> constraints, List <ViewDataModel.Constraint> parentList, SimpleSchema templateSchema, SimpleSchema.SchemaObject schemaObject = null)
{
foreach (var constraint in constraints.OrderBy(y => y.Order))
{
var theConstraint = constraint;
// TODO: Possible bug? Should schemaObject always be re-set? Remove schemaObject == null from if()
if (templateSchema != null && schemaObject == null)
{
schemaObject = templateSchema.Children.SingleOrDefault(y => y.Name == constraint.Context);
}
IFormattedConstraint fc = FormattedConstraintFactory.NewFormattedConstraint(this.tdb, igManager, igTypePlugin, theConstraint, this.constraintReferences.Cast <ConstraintReference>().ToList(), "#/volume2/", "#/valuesets/#", true, true, true, false);
var newConstraintModel = new ViewDataModel.Constraint()
{
Number = string.Format("{0}-{1}", theConstraint.Template.OwningImplementationGuideId, theConstraint.Number),
Narrative = fc.GetHtml(string.Empty, 1, true),
Conformance = theConstraint.Conformance,
Cardinality = theConstraint.Cardinality,
Context = theConstraint.Context,
DataType = theConstraint.DataType,
Value = theConstraint.Value,
ValueSetIdentifier = theConstraint.ValueSet != null?theConstraint.ValueSet.GetIdentifier(igTypePlugin) : null,
ValueSetDate = theConstraint.ValueSetDate != null?theConstraint.ValueSetDate.Value.ToShortDateString() : null,
IsChoice = theConstraint.IsChoice
};
newConstraintModel.ContainedTemplates = (from cr in this.constraintReferences
where cr.TemplateConstraintId == theConstraint.Id
select new ViewDataModel.TemplateReference()
{
Identifier = cr.Identifier,
Bookmark = cr.Bookmark,
ImplementationGuide = cr.ImplementationGuide,
PublishDate = cr.PublishDate,
Name = cr.Name
}).ToList();
var isFhir = constraint.Template.ImplementationGuideType.SchemaURI == ImplementationGuideType.FHIR_NS;
// Check if we're dealing with a FHIR constraint
if (isFhir && schemaObject != null)
{
newConstraintModel.DataType = schemaObject.DataType;
}
parentList.Add(newConstraintModel);
var nextSchemaObject = schemaObject != null?
schemaObject.Children.SingleOrDefault(y => y.Name == constraint.Context) :
null;
// Recursively add child constraints
CreateConstraints(igManager, igTypePlugin, theConstraint.ChildConstraints, newConstraintModel.Constraints, null, nextSchemaObject);
}
}
