static CompositeScorer()
{
ScoreParam = new ScoreWeight()
{
Beta0 = -5.39335774417474 * WeightScaleFactor,
Cutoff = 3.0 * WeightScaleFactor,
ComplementaryIonCount = -0.378768218613132 * WeightScaleFactor,
Prefix = new IonScoreWeight
{
Count = -1.125486077 * WeightScaleFactor,
ConsecutiveMatch = 0.125523007 * WeightScaleFactor,
Intensity = 0.323923971 * WeightScaleFactor,
Corr = 1.473096149 * WeightScaleFactor,
Dist = 0.179502658 * WeightScaleFactor,
MassError = -0.032959575 * WeightScaleFactor,
},
Suffix = new IonScoreWeight()
{
Count = -0.886170429 * WeightScaleFactor,
ConsecutiveMatch = 0.083704707 * WeightScaleFactor,
Intensity = 0.372673677 * WeightScaleFactor,
Corr = 1.18929338 * WeightScaleFactor,
Dist = -0.284321389 * WeightScaleFactor,
MassError = -0.026141488 * WeightScaleFactor,
},
};
}
public void SetScoreWeight(ScoreWeight weight)
{
scoreWeight = weight;
}
static CompositeScorer()
{
/*ScoreParam = new ScoreWeight()
{
Beta0 = -5.39335774417474*WeightScaleFactor,
Cutoff = 2.5 * WeightScaleFactor,
ComplementaryIonCount = -0.378768218613132 * WeightScaleFactor,
Prefix = new IonScoreWeight
{
Count = -1.125486077 * WeightScaleFactor,
ConsecutiveMatch = 0.125523007 * WeightScaleFactor,
Intensity = 0.323923971 * WeightScaleFactor,
Corr = 1.473096149 * WeightScaleFactor,
Dist = 0.179502658 * WeightScaleFactor,
MassError = -0.032959575 * WeightScaleFactor,
},
Suffix = new IonScoreWeight()
{
Count = -0.886170429 * WeightScaleFactor,
ConsecutiveMatch = 0.083704707 * WeightScaleFactor,
Intensity = 0.372673677 * WeightScaleFactor,
Corr = 1.18929338 * WeightScaleFactor,
Dist = -0.284321389 * WeightScaleFactor,
MassError = -0.026141488 * WeightScaleFactor,
},
};*/
var trainedParam = new double[]
{
-4.35615875783574,
-0.263297798433790,
-0.863126458013878,
0.238325241230975,
0.294277332664349,
0.882288576167220,
0.732263929496114,
-0.0199416790747384,
-0.498811136842684,
0.180874679890120,
0.299790673329884,
0.492391631834416,
0.314410358803801,
-0.0134845040032297,
};
ScoreParam = new ScoreWeight()
{
Beta0 = trainedParam[0] * WeightScaleFactor,
Cutoff = 2.0 * WeightScaleFactor,
ComplementaryIonCount = trainedParam[1] * WeightScaleFactor,
Prefix = new IonScoreWeight
{
Count = trainedParam[2] * WeightScaleFactor,
ConsecutiveMatch = trainedParam[3] * WeightScaleFactor,
Intensity = trainedParam[4] * WeightScaleFactor,
Corr = trainedParam[5] * WeightScaleFactor,
Dist = trainedParam[6] * WeightScaleFactor,
MassError = trainedParam[7] * WeightScaleFactor,
},
Suffix = new IonScoreWeight()
{
Count = trainedParam[8] * WeightScaleFactor,
ConsecutiveMatch = trainedParam[9] * WeightScaleFactor,
Intensity = trainedParam[10] * WeightScaleFactor,
Corr = trainedParam[11] * WeightScaleFactor,
Dist = trainedParam[12] * WeightScaleFactor,
MassError = trainedParam[13] * WeightScaleFactor,
},
};
}
static CompositeScorer()
{
/*ScoreParam = new ScoreWeight()
* {
* Beta0 = -5.39335774417474*WeightScaleFactor,
* Cutoff = 2.5 * WeightScaleFactor,
* ComplementaryIonCount = -0.378768218613132 * WeightScaleFactor,
* Prefix = new IonScoreWeight
* {
* Count = -1.125486077 * WeightScaleFactor,
* ConsecutiveMatch = 0.125523007 * WeightScaleFactor,
* Intensity = 0.323923971 * WeightScaleFactor,
* Corr = 1.473096149 * WeightScaleFactor,
* Dist = 0.179502658 * WeightScaleFactor,
* MassError = -0.032959575 * WeightScaleFactor,
* },
* Suffix = new IonScoreWeight()
* {
* Count = -0.886170429 * WeightScaleFactor,
* ConsecutiveMatch = 0.083704707 * WeightScaleFactor,
* Intensity = 0.372673677 * WeightScaleFactor,
* Corr = 1.18929338 * WeightScaleFactor,
* Dist = -0.284321389 * WeightScaleFactor,
* MassError = -0.026141488 * WeightScaleFactor,
* },
* };*/
var trainedParam = new double[]
{
-4.35615875783574,
-0.263297798433790,
-0.863126458013878,
0.238325241230975,
0.294277332664349,
0.882288576167220,
0.732263929496114,
-0.0199416790747384,
-0.498811136842684,
0.180874679890120,
0.299790673329884,
0.492391631834416,
0.314410358803801,
-0.0134845040032297,
};
ScoreParam = new ScoreWeight()
{
Beta0 = trainedParam[0] * WeightScaleFactor,
Cutoff = 2.0 * WeightScaleFactor,
ComplementaryIonCount = trainedParam[1] * WeightScaleFactor,
Prefix = new IonScoreWeight
{
Count = trainedParam[2] * WeightScaleFactor,
ConsecutiveMatch = trainedParam[3] * WeightScaleFactor,
Intensity = trainedParam[4] * WeightScaleFactor,
Corr = trainedParam[5] * WeightScaleFactor,
Dist = trainedParam[6] * WeightScaleFactor,
MassError = trainedParam[7] * WeightScaleFactor,
},
Suffix = new IonScoreWeight()
{
Count = trainedParam[8] * WeightScaleFactor,
ConsecutiveMatch = trainedParam[9] * WeightScaleFactor,
Intensity = trainedParam[10] * WeightScaleFactor,
Corr = trainedParam[11] * WeightScaleFactor,
Dist = trainedParam[12] * WeightScaleFactor,
MassError = trainedParam[13] * WeightScaleFactor,
},
};
}