public void Schema_Drop_Should_Contain_SQL(string dbType)
{
// Arrange
SchemaBase schema = SchemaLookup.FromName(dbType);
DbCommandStub dbCommand = new DbCommandStub();
// Act
schema.Drop(dbCommand);
// Assert
Assert.That(dbCommand.CommandText, Is.StringContaining("DROP"));
}
public void Schema_Create_Should_Contain_SQL(string dbType)
{
// Arrange
SchemaBase schema = SchemaLookup.FromName(dbType);
DbCommandStub dbCommand = new DbCommandStub();
// Act
schema.Create(dbCommand);
// Assert
Assert.That(dbCommand.CommandText, Is.StringContaining("CREATE TABLE"));
}
public static void MultiTask_TaskCompute(int id, Object task_data)
{
MultiTask_DataObj thisDataObj = (MultiTask_DataObj)task_data;
try
{
SchemaLookup lookup = new SchemaLookup(thisDataObj.mParts[0], thisDataObj.mParts[1]);
lookup.setInput(TnmStagingData.SSF25_KEY, thisDataObj.mParts[2]);
lookup.setInput(TnmStagingData.SEX_KEY, thisDataObj.mParts[2]);
List <StagingSchema> lookups = mMultiTask_Staging.lookupSchema(lookup);
if (lookups == null)
{
IntegrationUtils.WritelineToLog("Line #" + thisDataObj.miLineNum + " [" + thisDataObj.msFullLine + "] --> mStaging.lookupSchema returned NULL.");
Interlocked.Increment(ref miMultiTask_FailedCases);
}
else if (thisDataObj.mParts[3].Length == 0)
{
if (lookups.Count == 1)
{
IntegrationUtils.WritelineToLog("Line #" + thisDataObj.miLineNum + " [" + thisDataObj.msFullLine + "] --> The schema selection should not have found any schema but did: " + lookups[0].getId());
Interlocked.Increment(ref miMultiTask_FailedCases);
}
}
else
{
if (lookups.Count != 1)
{
IntegrationUtils.WritelineToLog("Line #" + thisDataObj.miLineNum + " [" + thisDataObj.msFullLine + "] --> The schema selection should have found a schema, " + thisDataObj.mParts[3] + ", but did not.");
Interlocked.Increment(ref miMultiTask_FailedCases);
}
else if (lookups[0].getId() != thisDataObj.mParts[3])
{
IntegrationUtils.WritelineToLog("Line #" + thisDataObj.miLineNum + " [" + thisDataObj.msFullLine + "] --> The schema selection found schema " + lookups[0].getId() + " but it should have been " + thisDataObj.mParts[3] + ".");
Interlocked.Increment(ref miMultiTask_FailedCases);
}
}
}
catch (Exception e)
{
if (miMultiTask_FailedCases == 0)
{
IntegrationUtils.WritelineToLog("Line #" + thisDataObj.miLineNum + " --> Exception processing schema selection: " + e.Message);
IntegrationUtils.WritelineToLog(" StackTrace: " + e.StackTrace);
}
Interlocked.Increment(ref miMultiTask_FailedCases);
}
Interlocked.Increment(ref miMultiTask_ThreadProcessedCases);
}
public static void MultiTask_TaskCompute(int id, Object task_data)
{
MultiTask_DataObj thisDataObj = (MultiTask_DataObj)task_data;
//IntegrationUtils.WritelineToLog("Task " + id + " - Executing Line " + thisDataObj.miLineNum + " - " + DateTime.Now.ToString("HH:mm:ss.ffff"));
// load up inputs
CsStagingData data = new CsStagingData();
data.setInput(CsInput.PRIMARY_SITE, thisDataObj.mValues[0]);
data.setInput(CsInput.HISTOLOGY, thisDataObj.mValues[1]);
data.setInput(CsInput.DX_YEAR, thisDataObj.mValues[2]);
data.setInput(CsInput.CS_VERSION_ORIGINAL, thisDataObj.mValues[3]);
data.setInput(CsInput.BEHAVIOR, thisDataObj.mValues[4]);
data.setInput(CsInput.GRADE, thisDataObj.mValues[5]);
data.setInput(CsInput.AGE_AT_DX, thisDataObj.mValues[6]);
data.setInput(CsInput.LVI, thisDataObj.mValues[7]);
data.setInput(CsInput.TUMOR_SIZE, thisDataObj.mValues[8]);
data.setInput(CsInput.EXTENSION, thisDataObj.mValues[9]);
data.setInput(CsInput.EXTENSION_EVAL, thisDataObj.mValues[10]);
data.setInput(CsInput.LYMPH_NODES, thisDataObj.mValues[11]);
data.setInput(CsInput.LYMPH_NODES_EVAL, thisDataObj.mValues[12]);
data.setInput(CsInput.REGIONAL_NODES_POSITIVE, thisDataObj.mValues[13]);
data.setInput(CsInput.REGIONAL_NODES_EXAMINED, thisDataObj.mValues[14]);
data.setInput(CsInput.METS_AT_DX, thisDataObj.mValues[15]);
data.setInput(CsInput.METS_EVAL, thisDataObj.mValues[16]);
data.setInput(CsInput.SSF1, thisDataObj.mValues[17]);
data.setInput(CsInput.SSF2, thisDataObj.mValues[18]);
data.setInput(CsInput.SSF3, thisDataObj.mValues[19]);
data.setInput(CsInput.SSF4, thisDataObj.mValues[20]);
data.setInput(CsInput.SSF5, thisDataObj.mValues[21]);
data.setInput(CsInput.SSF6, thisDataObj.mValues[22]);
data.setInput(CsInput.SSF7, thisDataObj.mValues[23]);
data.setInput(CsInput.SSF8, thisDataObj.mValues[24]);
data.setInput(CsInput.SSF9, thisDataObj.mValues[25]);
data.setInput(CsInput.SSF10, thisDataObj.mValues[26]);
data.setInput(CsInput.SSF11, thisDataObj.mValues[27]);
data.setInput(CsInput.SSF12, thisDataObj.mValues[28]);
data.setInput(CsInput.SSF13, thisDataObj.mValues[29]);
data.setInput(CsInput.SSF14, thisDataObj.mValues[30]);
data.setInput(CsInput.SSF15, thisDataObj.mValues[31]);
data.setInput(CsInput.SSF16, thisDataObj.mValues[32]);
data.setInput(CsInput.SSF17, thisDataObj.mValues[33]);
data.setInput(CsInput.SSF18, thisDataObj.mValues[34]);
data.setInput(CsInput.SSF19, thisDataObj.mValues[35]);
data.setInput(CsInput.SSF20, thisDataObj.mValues[36]);
data.setInput(CsInput.SSF21, thisDataObj.mValues[37]);
data.setInput(CsInput.SSF22, thisDataObj.mValues[38]);
data.setInput(CsInput.SSF23, thisDataObj.mValues[39]);
data.setInput(CsInput.SSF24, thisDataObj.mValues[40]);
data.setInput(CsInput.SSF25, thisDataObj.mValues[41]);
try
{
// save the expected outputs
Dictionary <String, String> output = new Dictionary <String, String>(100, StringComparer.Ordinal);
String sKeyValue = "";
foreach (KeyValuePair <CsOutput, int> entry in thisDataObj.mMappings)
{
sKeyValue = entry.Key.toString();
output[sKeyValue] = thisDataObj.mValues[entry.Value];
}
// run collaborative stage; if no schema found, set the output to empty
SchemaLookup lookup = new SchemaLookup(data.getInput(CsInput.PRIMARY_SITE), data.getInput(CsInput.HISTOLOGY));
lookup.setInput(CsStagingData.SSF25_KEY, data.getInput(CsInput.SSF25));
List <StagingSchema> schemas = mMultiTask_Staging.lookupSchema(lookup);
if (schemas.Count == 1)
{
mMultiTask_Staging.stage(data);
}
else
{
Dictionary <String, String> outResult = new Dictionary <String, String>(2, StringComparer.Ordinal);
outResult["schema_id"] = "<invalid>";
data.setOutput(outResult);
}
List <String> mismatches = new List <String>();
// compare results
foreach (KeyValuePair <String, String> entry in output)
{
String expected = "";
output.TryGetValue(entry.Key, out expected);
if (expected == null)
{
expected = "";
}
expected = expected.Trim();
String actual = "";
data.getOutput().TryGetValue(entry.Key, out actual);
if (actual == null)
{
actual = "";
}
actual = actual.Trim();
if (expected != actual)
{
mismatches.Add(" " + thisDataObj.miLineNum + " --> " + entry.Key + ": EXPECTED '" + expected + "' ACTUAL: '" + actual + "'");
}
}
if (mismatches.Count != 0)
{
String sSchemaIDValue = data.getSchemaId();
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " --> [" + sSchemaIDValue + "] Mismatches in " + thisDataObj.msFileName);
foreach (String mismatch in mismatches)
{
IntegrationUtils.WritelineToLog(mismatch);
}
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " *** RESULT: " + data.getResult());
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " --> " + IntegrationUtils.convertInputMap(data.getInput()));
if (data.getErrors().Count > 0)
{
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " --> ERRORS: ");
foreach (Error e in data.getErrors())
{
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " --> (" + e.getTable() + ": " + e.getMessage() + ") ");
}
}
Interlocked.Increment(ref miMultiTask_FailedCases);
}
}
catch (Exception e)
{
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " --> Exception processing " + thisDataObj.msFileName + " : " + e.Message);
Interlocked.Increment(ref miMultiTask_FailedCases);
}
Interlocked.Increment(ref miMultiTask_ThreadProcessedCases);
}
public static void MultiTask_TaskCompute(int id, Object task_data)
{
MultiTask_DataObj thisDataObj = (MultiTask_DataObj)task_data;
try
{
// load up inputs
TnmStagingData data = new TnmStagingData();
foreach (KeyValuePair <TnmInput, String> kp in thisDataObj.mInputValues)
{
data.setInput(kp.Key, kp.Value);
}
// save the expected outputs
Dictionary <String, String> output = new Dictionary <String, String>(100, StringComparer.Ordinal);
String sKeyValue = "";
foreach (KeyValuePair <TnmOutput, String> entry in thisDataObj.mOutputValues)
{
sKeyValue = entry.Key.toString();
output[sKeyValue] = entry.Value;
}
// run collaborative stage; if no schema found, set the output to empty
SchemaLookup lookup = new SchemaLookup(data.getInput(TnmInput.PRIMARY_SITE), data.getInput(TnmInput.HISTOLOGY));
lookup.setInput(TnmStagingData.SEX_KEY, data.getInput(TnmInput.SEX));
lookup.setInput(TnmStagingData.SSF25_KEY, data.getInput(TnmInput.SSF25));
List <StagingSchema> schemas = mMultiTask_Staging.lookupSchema(lookup);
if (schemas.Count == 1)
{
mMultiTask_Staging.stage(data);
}
else
{
Dictionary <String, String> outResult = new Dictionary <String, String>(2, StringComparer.Ordinal);
outResult["schema_id"] = "<invalid>";
data.setOutput(outResult);
}
List <String> mismatches = new List <String>();
// compare results
if (!thisDataObj.mbJSONFormat)
{
String sNewResultStr = "";
String sOldResultStr = thisDataObj.msExpectedResult.Trim();
if (data.getResult() == StagingData.Result.STAGED)
{
sNewResultStr = "STAGED";
}
else if (data.getResult() == StagingData.Result.FAILED_MISSING_SITE_OR_HISTOLOGY)
{
sNewResultStr = "FAILED_MISSING_SITE_OR_HISTOLOGY";
}
else if (data.getResult() == StagingData.Result.FAILED_NO_MATCHING_SCHEMA)
{
sNewResultStr = "FAILED_NO_MATCHING_SCHEMA";
}
else if (data.getResult() == StagingData.Result.FAILED_MULITPLE_MATCHING_SCHEMAS)
{
sNewResultStr = "FAILED_MULITPLE_MATCHING_SCHEMAS";
}
else if (data.getResult() == StagingData.Result.FAILED_INVALID_YEAR_DX)
{
sNewResultStr = "FAILED_INVALID_YEAR_DX";
}
else if (data.getResult() == StagingData.Result.FAILED_INVALID_INPUT)
{
sNewResultStr = "FAILED_INVALID_INPUT";
}
if (sNewResultStr != sOldResultStr)
{
mismatches.Add(" " + thisDataObj.miLineNum + " --> Result: EXPECTED '" + sOldResultStr + "' ACTUAL: '" + sNewResultStr + "'");
}
}
// compare output
foreach (KeyValuePair <String, String> entry in output)
{
String expected = "";
output.TryGetValue(entry.Key, out expected);
if (expected == null)
{
expected = "";
}
expected = expected.Trim();
String actual = "";
data.getOutput().TryGetValue(entry.Key, out actual);
if (actual == null)
{
actual = "";
}
actual = actual.Trim();
if (expected != actual)
{
mismatches.Add(" " + thisDataObj.miLineNum + " --> " + entry.Key + ": EXPECTED '" + expected + "' ACTUAL: '" + actual + "'");
}
}
if (mismatches.Count != 0)
{
String sSchemaIDValue = data.getSchemaId();
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " --> [" + sSchemaIDValue + "] Mismatches in " + thisDataObj.msFileName);
foreach (String mismatch in mismatches)
{
IntegrationUtils.WritelineToLog(mismatch);
}
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " *** RESULT: " + data.getResult());
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " --> Input: " + IntegrationUtils.convertInputMap(data.getInput()));
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " --> Output: " + IntegrationUtils.convertInputMap(data.getOutput()));
if (data.getErrors().Count > 0)
{
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " --> ERRORS: ");
foreach (Error e in data.getErrors())
{
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " --> (" + e.getTable() + ": " + e.getMessage() + ") ");
}
}
Interlocked.Increment(ref miMultiTask_FailedCases);
}
}
catch (Exception e)
{
IntegrationUtils.WritelineToLog(" " + thisDataObj.miLineNum + " --> Exception processing " + thisDataObj.msFileName + " : " + e.Message);
Interlocked.Increment(ref miMultiTask_FailedCases);
}
Interlocked.Increment(ref miMultiTask_ThreadProcessedCases);
}
