public void ValidateRowKeysPairAnsiGetInstanceFromRowKeysAnsiFileAccess()
{
DenseMatrix <string, string, double> denseMatObj =
GetDenseMatrix();
ParallelOptions parOptObj = new ParallelOptions();
denseMatObj.WritePaddedDouble(Constants.FastQTempTxtFileName, parOptObj);
using (RowKeysPaddedDouble rkpdObj =
RowKeysPaddedDouble.GetInstanceFromPaddedDouble(Constants.FastQTempTxtFileName,
parOptObj))
{
rkpdObj.WriteRowKeys(Constants.KeysTempFile);
}
using (RowKeysPaddedDouble rkaObj =
RowKeysPaddedDouble.GetInstanceFromRowKeys(
Constants.KeysTempFile, parOptObj, FileAccess.ReadWrite,
FileShare.ReadWrite))
{
Assert.AreEqual(denseMatObj.ColCount, rkaObj.ColCount);
Assert.AreEqual(denseMatObj.RowCount, rkaObj.RowCount);
Assert.AreEqual(denseMatObj.RowKeys.Count, rkaObj.RowKeys.Count);
Assert.AreEqual(denseMatObj.ColKeys.Count, rkaObj.ColKeys.Count);
}
if (File.Exists(Constants.FastQTempTxtFileName))
{
File.Delete(Constants.FastQTempTxtFileName);
}
if (File.Exists(Constants.KeysTempFile))
{
File.Delete(Constants.KeysTempFile);
}
ApplicationLog.WriteLine(
"RowKeysPairAnsi BVT : Validation of GetInstanceFromRowKeysAnsi(file-access) method successful");
}
private Matrix <string, string, TValue> LoadParentMatrix(string name)
{
if (Verbose)
{
Console.WriteLine("Loading " + name);
}
if (LeaveOnDiskIfPossible)
{
try
{
RowKeysAnsi predictorCharOriginal0 = RowKeysAnsi.GetInstanceFromRowKeysAnsi(name, ParallelOptionsScope.Current);
Matrix <string, string, TValue> predictorCharOriginal = predictorCharOriginal0.ConvertValueView(CharToTValConverter, MissingValueForParse);
//Matrix<string,string,TValue> predictorCharOriginal = predictorCharOriginal0.ConvertValueView(Bio.Util.ValueConverter.CharToDouble, double.NaN);
Helper.CheckCondition(null == CreateRowKeysFileOrNull, "Already reading from a RowKeyAnsi file, so can't create one.");
return(predictorCharOriginal);
}
catch (MatrixFormatException)
{//ignore
}
try
{
RowKeysAnsi predictorCharOriginal0 = RowKeysAnsi.GetInstanceFromDenseAnsi(name, ParallelOptionsScope.Current);
if (null != CreateRowKeysFileOrNull)
{
predictorCharOriginal0.WriteRowKeys(CreateRowKeysFileOrNull);
}
Matrix <string, string, TValue> predictorCharOriginal = predictorCharOriginal0.ConvertValueView(CharToTValConverter, MissingValueForParse);
//Matrix<string, string, TValue> predictorCharOriginal = predictorCharOriginal0.ConvertValueView(Bio.Util.ValueConverter.CharToDouble, double.NaN);
return(predictorCharOriginal);
}
catch (MatrixFormatException)
{//ignore
}
try
{
RowKeysPaddedDouble predictorCharOriginal0 = RowKeysPaddedDouble.GetInstanceFromRowKeys(name, ParallelOptionsScope.Current);
Matrix <string, string, TValue> predictorCharOriginal = predictorCharOriginal0.ConvertValueView(DoubleToTValConverter, MissingValueForParse);
//Matrix<string,string,TValue> predictorCharOriginal = predictorCharOriginal0.ConvertValueView(Bio.Util.ValueConverter.CharToDouble, double.NaN);
Helper.CheckCondition(null == CreateRowKeysFileOrNull, "Already reading from a RowKeyAnsi file, so can't create one.");
return(predictorCharOriginal);
}
catch (MatrixFormatException)
{//ignore
}
try
{
RowKeysPaddedDouble predictorCharOriginal0 = RowKeysPaddedDouble.GetInstanceFromPaddedDouble(name, ParallelOptionsScope.Current);
if (null != CreateRowKeysFileOrNull)
{
predictorCharOriginal0.WriteRowKeys(CreateRowKeysFileOrNull);
}
Matrix <string, string, TValue> predictorCharOriginal = predictorCharOriginal0.ConvertValueView(DoubleToTValConverter, MissingValueForParse);
//Matrix<string, string, TValue> predictorCharOriginal = predictorCharOriginal0.ConvertValueView(Bio.Util.ValueConverter.CharToDouble, double.NaN);
return(predictorCharOriginal);
}
catch (MatrixFormatException)
{//ignore
}
}
Matrix <string, string, TValue> predictorCharOriginalX = MatrixFactory.Parse(name, MissingValueForParse, ParallelOptionsScope.Current);
Helper.CheckCondition(null == CreateRowKeysFileOrNull, "Not creating from a DenseAnsi file, so can't create a RowKeyAnsi file.");
return(predictorCharOriginalX);
}
/// <summary>
/// Preforms unit tests related to setting and reading value on all the built-in matrix types.
/// </summary>
/// <param name="doOutOfRangeTest">If true performs a test should throw a caught exception.</param>
/// <param name="parallelOptions">A ParallelOptions instance that configures the multithreaded behavior of this operation.</param>
public static void MainTest(bool doOutOfRangeTest, ParallelOptions parallelOptions)
{
//densematrix
TestByKeysAndIndexes(() => CreateModelMatrix().ToDenseMatrix(), doOutOfRangeTest);
//sparsematrix
TestByKeysAndIndexes(() => CreateModelMatrix().ToSparseMatrix(), doOutOfRangeTest);
//TransposeView
TestByKeysAndIndexes(() => CreateModelMatrix().TransposeView().ToDenseMatrix().TransposeView(), doOutOfRangeTest);
//ConvertValueView
TestByKeysAndIndexes(() => CreateModelMatrix().ConvertValueView(ValueConverter.DoubleToInt, int.MaxValue).ToDenseMatrix().ConvertValueView(ValueConverter.IntToDouble, double.NaN), doOutOfRangeTest);
//SelectRowsAndColsView
TestByKeysAndIndexes(() => CreateModelMatrix().SelectRowsAndColsView(new int[] { 2, 1, 0 }, new int[] { 2, 1, 0 }).ToDenseMatrix().SelectRowsAndColsView(new int[] { 2, 1, 0 }, new int[] { 2, 1, 0 }), doOutOfRangeTest);
//RenameColsView
TestByKeysAndIndexes(() => CreateModelMatrix().RenameColsView(new Dictionary <string, string> {
{ "x", "X" }, { "y", "Y" }, { "z", "Z" }
}).ToDenseMatrix().RenameColsView(new Dictionary <string, string> {
{ "X", "x" }, { "Y", "y" }, { "Z", "z" }
}), doOutOfRangeTest);
//PermuteColValuesForEachRowView
TestByKeysAndIndexes(() => CreateModelMatrix().PermuteColValuesForEachRowView(new int[] { 2, 1, 0 }).ToDenseMatrix().PermuteColValuesForEachRowView(new int[] { 2, 1, 0 }), doOutOfRangeTest);
//MergeColsView
TestByKeysAndIndexes(() => CreateModelMatrix().SelectColsView(0).ToDenseMatrix().MergeColsView(/*rowsMustMatch*/ true, CreateModelMatrix().SelectColsView(1, 2).ToDenseMatrix()), doOutOfRangeTest);
//MergeRowsView
TestByKeysAndIndexes(() => CreateModelMatrix().SelectRowsView(0).ToDenseMatrix().MergeRowsView(/*colsMustMatch*/ true, CreateModelMatrix().SelectRowsView(1, 2).ToDenseMatrix()), doOutOfRangeTest);
//rowkeyspaddeddouble
TestByKeysAndIndexes(() => CreateModelMatrix().ToPaddedDouble(parallelOptions), doOutOfRangeTest);
//rowkeysansi
TestByKeysAndIndexes(() => CreateModelMatrix().ConvertValueView(ValueConverter.DoubleToChar, '?').ToDenseAnsi(parallelOptions).ConvertValueView(ValueConverter.CharToDouble, double.NaN), doOutOfRangeTest);
//densepairansi
ValueConverter <double, UOPair <char> > doubleToUOPairConvert = new ValueConverter <double, UOPair <char> >(
r => new UOPair <char>(((int)r).ToString((IFormatProvider)null)[0], ((int)r).ToString((IFormatProvider)null)[0]),
pair => double.Parse(pair.First.ToString((IFormatProvider)null), (IFormatProvider)null));
TestByKeysAndIndexes(() => CreateModelMatrix().ConvertValueView(doubleToUOPairConvert, DensePairAnsi.StaticMissingValue).ToDensePairAnsi(parallelOptions).ConvertValueView(doubleToUOPairConvert.Inverted, double.NaN), doOutOfRangeTest);
//RowKeysPaddedDouble
string paddedDoubleFile = Path.GetTempFileName();
CreateModelMatrix().WritePaddedDouble(paddedDoubleFile, parallelOptions);
using (RowKeysPaddedDouble rowKeysPaddedDouble = RowKeysPaddedDouble.GetInstanceFromPaddedDouble(paddedDoubleFile, parallelOptions, FileAccess.ReadWrite, FileShare.ReadWrite))
{
TestByKeys(rowKeysPaddedDouble, doOutOfRangeTest);
}
CreateModelMatrix().WritePaddedDouble(paddedDoubleFile, parallelOptions);
using (RowKeysPaddedDouble rowKeysPaddedDouble = RowKeysPaddedDouble.GetInstanceFromPaddedDouble(paddedDoubleFile, parallelOptions, FileAccess.ReadWrite, FileShare.ReadWrite))
{
TestByIndexes(rowKeysPaddedDouble, doOutOfRangeTest);
}
File.Delete(paddedDoubleFile);
//RowKeysRowKeysAnsi
string rowKeysAnsiFile = Path.GetTempFileName();
CreateModelMatrix().WriteDenseAnsi(rowKeysAnsiFile, parallelOptions);
using (RowKeysAnsi rowKeysRowKeysAnsi = RowKeysAnsi.GetInstanceFromDenseAnsi(rowKeysAnsiFile, parallelOptions, FileAccess.ReadWrite, FileShare.ReadWrite))
{
TestByKeys(rowKeysRowKeysAnsi.ConvertValueView(ValueConverter.CharToDouble, double.NaN), doOutOfRangeTest);
}
CreateModelMatrix().WriteDenseAnsi(rowKeysAnsiFile, parallelOptions);
using (RowKeysAnsi rowKeysRowKeysAnsi = RowKeysAnsi.GetInstanceFromDenseAnsi(rowKeysAnsiFile, parallelOptions, FileAccess.ReadWrite, FileShare.ReadWrite))
{
TestByIndexes(rowKeysRowKeysAnsi.ConvertValueView(ValueConverter.CharToDouble, double.NaN), doOutOfRangeTest);
}
File.Delete(rowKeysAnsiFile);
//RowKeysRowKeysPairAnsi
string rowKeysPairAnsiFile = Path.GetTempFileName();
CreateModelMatrix().ConvertValueView(doubleToUOPairConvert, DensePairAnsi.StaticMissingValue).WriteDensePairAnsi(rowKeysPairAnsiFile, parallelOptions);
using (RowKeysPairAnsi rowKeysAnsiPair = RowKeysPairAnsi.GetInstanceFromPairAnsi(rowKeysPairAnsiFile, parallelOptions, FileAccess.ReadWrite, FileShare.ReadWrite))
{
TestByKeys(rowKeysAnsiPair.ConvertValueView(doubleToUOPairConvert.Inverted, double.NaN), doOutOfRangeTest);
}
CreateModelMatrix().ConvertValueView(doubleToUOPairConvert, DensePairAnsi.StaticMissingValue).WriteDensePairAnsi(rowKeysPairAnsiFile, parallelOptions);
using (RowKeysPairAnsi rowKeysRowKeysAnsi = RowKeysPairAnsi.GetInstanceFromPairAnsi(rowKeysPairAnsiFile, parallelOptions, FileAccess.ReadWrite, FileShare.ReadWrite))
{
TestByIndexes(rowKeysRowKeysAnsi.ConvertValueView(doubleToUOPairConvert.Inverted, double.NaN), doOutOfRangeTest);
}
File.Delete(rowKeysPairAnsiFile);
}