protected override void OnExecute(CommandProcessor theProcessor, IUpdateContext updateContext) { string seriesUid = _file.DataSet[DicomTags.SeriesInstanceUid].GetString(0, String.Empty); string sopUid = _file.DataSet[DicomTags.SopInstanceUid].GetString(0, String.Empty); ImageSetDescriptor imageSet = new ImageSetDescriptor(_file.DataSet); ReconcileStudyQueueDescription queueDesc = GetQueueEntryDescription(_storageLocation, _file); ReconcileStudyWorkQueueData detailsData = new ReconcileStudyWorkQueueData { StoragePath = _reconcileImageStorage.GetFolderPath(), Details = new ImageSetDetails(_file.DataSet) }; detailsData.Details.InsertFile(_file); IInsertStudyIntegrityQueue broker = updateContext.GetBroker <IInsertStudyIntegrityQueue>(); InsertStudyIntegrityQueueParameters parameters = new InsertStudyIntegrityQueueParameters { Description = queueDesc.ToString(), StudyInstanceUid = _storageLocation.StudyInstanceUid, ServerPartitionKey = _storageLocation.ServerPartition.Key, StudyStorageKey = _storageLocation.Key, StudyIntegrityReasonEnum = _reason, SeriesInstanceUid = seriesUid, SeriesDescription = sopUid, SopInstanceUid = _file.DataSet[DicomTags.SopInstanceUid].GetString(0, String . Empty), StudyData = XmlUtils.SerializeAsXmlDoc(imageSet), Details = XmlUtils.SerializeAsXmlDoc(detailsData), GroupID = _uidGroup, UidRelativePath = _reconcileImageStorage.GetSopRelativePath( _file.DataSet[DicomTags.SopInstanceUid].ToString()) }; StudyIntegrityQueue item = broker.FindOne(parameters); if (item == null) { throw new ApplicationException("Unable to update reconcile queue"); } _siqItem = item; if (!parameters.Inserted) { // Need to re-use the path that's already assigned for this entry ReconcileStudyWorkQueueData data = XmlUtils.Deserialize <ReconcileStudyWorkQueueData>(item.Details); data.Details.InsertFile(_file); XmlDocument updatedQueueDataXml = XmlUtils.SerializeAsXmlDoc(data); IStudyIntegrityQueueEntityBroker updateBroker = updateContext.GetBroker <IStudyIntegrityQueueEntityBroker>(); StudyIntegrityQueueUpdateColumns columns = new StudyIntegrityQueueUpdateColumns { Details = updatedQueueDataXml }; updateBroker.Update(item.GetKey(), columns); } }
protected override void OnExecute(CommandProcessor theProcessor, IUpdateContext updateContext) { var broker = updateContext.GetBroker <IInsertDuplicateSopReceivedQueue>(); var parms = new InsertDuplicateSopReceivedQueueParameters { GroupID = _groupId, ServerPartitionKey = _studyLocation.ServerPartitionKey, StudyStorageKey = _studyLocation.Key, StudyInstanceUid = _file.DataSet[DicomTags.StudyInstanceUid].ToString(), SeriesDescription = _file.DataSet[DicomTags.SeriesDescription].ToString(), SeriesInstanceUid = _file.DataSet[DicomTags.SeriesInstanceUid].ToString(), SopInstanceUid = _file.MediaStorageSopInstanceUid }; ReconcileStudyQueueDescription queueDesc = CreateQueueEntryDescription(_file); parms.Description = queueDesc != null?queueDesc.ToString() : String.Empty; var queueData = new DuplicateSIQQueueData { StoragePath = _duplicateStoragePath, Details = new ImageSetDetails(_file.DataSet), TimeStamp = Platform.Time }; if (_reasons != null && _reasons.Count > 0) { queueData.ComparisonResults = _reasons; } var imageSet = new ImageSetDescriptor(_file.DataSet); parms.StudyData = XmlUtils.SerializeAsXmlDoc(imageSet); parms.Details = XmlUtils.SerializeAsXmlDoc(queueData); parms.UidRelativePath = _relativePath; IList <DuplicateSopReceivedQueue> entries = broker.Find(parms); Platform.CheckForNullReference(entries, "entries"); Platform.CheckTrue(entries.Count == 1, "entries.Count==1"); DuplicateSopReceivedQueue queueEntry = entries[0]; var data = XmlUtils.Deserialize <DuplicateSIQQueueData>(queueEntry.Details); data.Details.InsertFile(_file); queueEntry.Details = XmlUtils.SerializeAsXmlDoc(data); var siqBroker = updateContext.GetBroker <IStudyIntegrityQueueEntityBroker>(); if (!siqBroker.Update(queueEntry)) { throw new ApplicationException("Unable to update duplicate queue entry"); } }
private static ReconcileStudyQueueDescription GetQueueEntryDescription(StudyStorageLocation existingStorage, DicomMessageBase file) { ReconcileStudyQueueDescription desc = new ReconcileStudyQueueDescription { ExistingPatientId = existingStorage.Study.PatientId, ExistingPatientName = existingStorage.Study.PatientsName, ExistingAccessionNumber = existingStorage.Study.AccessionNumber, ConflictingPatientName = file.DataSet[DicomTags.PatientsName].GetString(0, String.Empty), ConflictingPatientId = file.DataSet[DicomTags.PatientId].GetString(0, String.Empty), ConflictingAccessionNumber = file.DataSet[DicomTags.AccessionNumber].GetString(0, String.Empty) }; return(desc); }
private ReconcileStudyQueueDescription CreateQueueEntryDescription(DicomFile file) { using (var context = new ServerExecutionContext()) { Study study = _studyLocation.LoadStudy(context.PersistenceContext); if (study != null) { var desc = new ReconcileStudyQueueDescription { ExistingPatientId = study.PatientId, ExistingPatientName = study.PatientsName, ExistingAccessionNumber = study.AccessionNumber, ConflictingPatientName = file.DataSet[DicomTags.PatientsName].ToString(), ConflictingPatientId = file.DataSet[DicomTags.PatientId].ToString(), ConflictingAccessionNumber = file.DataSet[DicomTags.AccessionNumber].ToString() }; return(desc); } return(null); } }
/// <summary> /// Constructs an instance of <see cref="WorkQueue"/> based on a <see cref="WorkQueueSummary"/> object. /// </summary> /// <param name="item"></param> /// <returns></returns> /// <remark> /// /// </remark> private StudyIntegrityQueueSummary CreateStudyIntegrityQueueSummary(StudyIntegrityQueue item) { var summary = new StudyIntegrityQueueSummary(); var ssAdaptor = new StudyStorageAdaptor(); var storages = ssAdaptor.Get(HttpContext.Current.GetSharedPersistentContext(), item.StudyStorageKey); try { summary.Reason = item.StudyIntegrityReasonEnum; summary.TheStudyIntegrityQueueItem = item; summary.ThePartition = Partition; var queueDescription = new ReconcileStudyQueueDescription(); queueDescription.Parse(item.Description); summary.QueueData = item.StudyIntegrityReasonEnum.Equals(StudyIntegrityReasonEnum.InconsistentData) ? XmlUtils.Deserialize <ReconcileStudyWorkQueueData>(item.Details) : XmlUtils.Deserialize <DuplicateSIQQueueData>(item.Details); ImageSetDescriptor studyData = ImageSetDescriptor.Parse(item.StudyData.DocumentElement); // These fields only exists in Enterprise version if (summary.QueueData.Details != null && summary.QueueData.Details.StudyInfo != null) { summary.ReceivedTime = item.InsertTime; summary.ConflictingPatientId = summary.QueueData.Details.StudyInfo.PatientInfo.PatientId; summary.ConflictingPatientName = summary.QueueData.Details.StudyInfo.PatientInfo.Name; summary.ConflictingAccessionNumber = summary.QueueData.Details.StudyInfo.AccessionNumber; summary.ConflictingStudyDate = summary.QueueData.Details.StudyInfo.StudyDate; summary.ConflictingStudyDescription = summary.QueueData.Details.StudyInfo.StudyDescription; var modalities = new List <string>(); List <SeriesInformation> seriesList = summary.QueueData.Details.StudyInfo.Series; foreach (SeriesInformation series in seriesList) { if (!modalities.Contains(series.Modality)) { modalities.Add(series.Modality); } } summary.ConflictingModalities = modalities.ToArray(); } else { string value; if (studyData.TryGetValue(DicomTags.PatientId, out value)) { summary.ConflictingPatientId = value; } if (studyData.TryGetValue(DicomTags.PatientsName, out value)) { summary.ConflictingPatientName = value; } if (studyData.TryGetValue(DicomTags.AccessionNumber, out value)) { summary.ConflictingAccessionNumber = value; } if (studyData.TryGetValue(DicomTags.StudyDate, out value)) { summary.ConflictingStudyDate = value; } if (studyData.TryGetValue(DicomTags.StudyDescription, out value)) { summary.ConflictingStudyDescription = value; } // no modality info } // Fetch existing study info. Note: this is done last because the study may not exist. Study study = storages.LoadStudy(HttpContext.Current.GetSharedPersistentContext()); summary.StudySummary = StudySummaryAssembler.CreateStudySummary(HttpContext.Current.GetSharedPersistentContext(), study); if (summary.StudySummary != null) { summary.StudyInstanceUid = summary.StudySummary.StudyInstanceUid; summary.ExistingPatientName = summary.StudySummary.PatientsName; summary.ExistingPatientId = summary.StudySummary.PatientId; summary.ExistingAccessionNumber = summary.StudySummary.AccessionNumber; } } catch (StudyNotFoundException) { // Study record may not exist. For eg, duplicate arrives but the existing study hasn't been processed. } return(summary); }