public void MichalewiczNonUniformAllPositionsManipulatorApplyTest() {
TestRandom random = new TestRandom();
RealVector parent, expected;
DoubleValue generationsDependency;
DoubleMatrix bounds;
IntValue currentGeneration, maximumGenerations;
bool exceptionFired;
// The following test is not based on published examples
random.Reset();
random.DoubleNumbers = new double[] { 0.2, 0.5, 0.7, 0.8, 0.9, 0.5, 0.2, 0.5, 0.7, 0.8 };
parent = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
expected = new RealVector(new double[] { 0.45, 0.22, 0.3, 0.6, 0.14 });
bounds = new DoubleMatrix(new double[,] { { 0.3, 0.7 } });
generationsDependency = new DoubleValue(0.1);
currentGeneration = new IntValue(1);
maximumGenerations = new IntValue(4);
MichalewiczNonUniformAllPositionsManipulator.Apply(random, parent, bounds, currentGeneration, maximumGenerations, generationsDependency);
Assert.IsTrue(Auxiliary.RealVectorIsAlmostEqualByPosition(expected, parent));
// The following test is not based on published examples
exceptionFired = false;
random.Reset();
random.DoubleNumbers = new double[] { 0.2, 0.5, 0.7, 0.8, 0.9, 0.5, 0.2, 0.5, 0.7, 0.8 };
parent = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
bounds = new DoubleMatrix(new double[,] { { 0.3, 0.7 } });
generationsDependency = new DoubleValue(0.1);
currentGeneration = new IntValue(5); //current generation > max generation
maximumGenerations = new IntValue(4);
try {
MichalewiczNonUniformAllPositionsManipulator.Apply(random, parent, bounds, currentGeneration, maximumGenerations, generationsDependency);
} catch (System.ArgumentException) {
exceptionFired = true;
}
Assert.IsTrue(exceptionFired);
}
public override void updateStep6(RealVector nBazaWart, List<String> nBazaNazwa)
{
tab.updateWektorBazaNazwy(nBazaNazwa);
tab.updateWektorBazaWart(nBazaWart);
tab.usunInformacjeZZc();
tab.usunInformacjeZPrawejStr();
}
public void DiscreteCrossoverApplyTest() {
TestRandom random = new TestRandom();
RealVector parent1, parent2, expected, actual;
ItemArray<RealVector> parents;
bool exceptionFired;
// The following test is not based on published examples
random.Reset();
random.IntNumbers = new int[] { 0, 0, 1, 0, 1 };
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
parents = new ItemArray<RealVector>(new RealVector[] { parent1, parent2 });
expected = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.8 });
actual = DiscreteCrossover.Apply(random, parents);
Assert.IsTrue(Auxiliary.RealVectorIsAlmostEqualByPosition(actual, expected));
// The following test is not based on published examples
random.Reset();
random.IntNumbers = new int[] { 0, 0, 1, 0, 1, 0 };
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1, 0.9 }); // this parent is longer
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
parents = new ItemArray<RealVector>(new RealVector[] { parent1, parent2 });
exceptionFired = false;
try {
actual = DiscreteCrossover.Apply(random, parents);
}
catch (System.ArgumentException) {
exceptionFired = true;
}
Assert.IsTrue(exceptionFired);
}
public void PolynomialAllPositionManipulatorApplyTest() {
TestRandom random = new TestRandom();
RealVector parent, expected;
DoubleValue contiguity, maxManipulation;
bool exceptionFired;
// The following test is not based on published examples
random.Reset();
random.DoubleNumbers = new double[] { 0.2, 0.7, 0.8, 0.01, 0.1 };
parent = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
expected = new RealVector(new double[] { 0.120213215256006, 0.249415354697564, 0.379786784743994, 0.322759240811056, -0.0182075293954083 });
contiguity = new DoubleValue(0.8);
maxManipulation = new DoubleValue(0.2);
PolynomialAllPositionManipulator.Apply(random, parent, contiguity, maxManipulation);
Assert.IsTrue(Auxiliary.RealVectorIsAlmostEqualByPosition(expected, parent));
// The following test is not based on published examples
exceptionFired = false;
random.Reset();
random.DoubleNumbers = new double[] { 0.2, 0.7, 0.8, 0.01, 0.1 };
parent = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
contiguity = new DoubleValue(-1); //Contiguity value < 0
maxManipulation = new DoubleValue(0.2);
try {
PolynomialAllPositionManipulator.Apply(random, parent, contiguity, maxManipulation);
} catch (System.ArgumentException) {
exceptionFired = true;
}
Assert.IsTrue(exceptionFired);
}
public void HeuristicCrossoverApplyTest() {
TestRandom random = new TestRandom();
RealVector parent1, parent2, expected, actual;
bool exceptionFired;
// The following test is not based on published examples
random.Reset();
random.DoubleNumbers = new double[] { 0.3 };
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
expected = new RealVector(new double[] { 0.14, 0.23, 0.3, 0.59, -0.11 });
actual = HeuristicCrossover.Apply(random, parent1, parent2);
Assert.IsTrue(Auxiliary.RealVectorIsAlmostEqualByPosition(actual, expected));
// The following test is not based on published examples
random.Reset();
random.DoubleNumbers = new double[] { 0.3 };
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1, 0.9 }); // this parent is longer
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
exceptionFired = false;
try {
actual = HeuristicCrossover.Apply(random, parent1, parent2);
}
catch (System.ArgumentException) {
exceptionFired = true;
}
Assert.IsTrue(exceptionFired);
}
public void PolynomialOnePositionManipulatorApplyTest() {
TestRandom random = new TestRandom();
RealVector parent, expected;
DoubleValue contiguity, maxManipulation;
bool exceptionFired;
// The following test is not based on published examples
random.Reset();
random.IntNumbers = new int[] { 3 };
random.DoubleNumbers = new double[] { 0.2 };
parent = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
expected = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.1261980542102, 0.1 });
contiguity = new DoubleValue(0.2);
maxManipulation = new DoubleValue(0.7);
PolynomialOnePositionManipulator.Apply(random, parent, contiguity, maxManipulation);
Assert.IsTrue(Auxiliary.RealVectorIsAlmostEqualByPosition(expected, parent));
// The following test is not based on published examples
exceptionFired = false;
random.Reset();
random.IntNumbers = new int[] { 3 };
random.DoubleNumbers = new double[] { 0.2 };
parent = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
contiguity = new DoubleValue(-1); //Contiguity value < 0
maxManipulation = new DoubleValue(0.2);
try {
PolynomialOnePositionManipulator.Apply(random, parent, contiguity, maxManipulation);
} catch (System.ArgumentException) {
exceptionFired = true;
}
Assert.IsTrue(exceptionFired);
}
public Wektor(Point _start, Type t,RealVector v)
{
elementyWektora = new List<PodstElem>();
start = _start;
typ = t;
setElementy(v);
}
public void SinglePointCrossoverApplyTest() {
TestRandom random = new TestRandom();
RealVector parent1, parent2, expected, actual;
bool exceptionFired;
// The following test is not based on published examples
random.Reset();
random.IntNumbers = new int[] { 3 };
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
expected = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.2, 0.8 });
actual = SinglePointCrossover.Apply(random, parent1, parent2);
Assert.IsTrue(Auxiliary.RealVectorIsAlmostEqualByPosition(actual, expected));
// The following test is not based on published examples
random.Reset();
random.IntNumbers = new int[] { 2 };
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1, 0.9 }); // this parent is longer
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
exceptionFired = false;
try {
actual = SinglePointCrossover.Apply(random, parent1, parent2);
}
catch (System.ArgumentException) {
exceptionFired = true;
}
Assert.IsTrue(exceptionFired);
// The following test is not based on published examples
random.Reset();
random.IntNumbers = new int[] { 5 }; // should not have an effect
parent1 = new RealVector(new double[] { 0.2, 0.4 });
parent2 = new RealVector(new double[] { 0.6, 0.1 });
expected = new RealVector(new double[] { 0.2, 0.1 });
actual = SinglePointCrossover.Apply(random, parent1, parent2);
Assert.IsTrue(Auxiliary.RealVectorIsAlmostEqualByPosition(actual, expected));
// The following test is not based on published examples
}
public RealVector getBazaWartosci()
{
RealVector temp = new RealVector();
for (int i = 0; i < bazaPocz.Count; i++) {
temp.Add(0.0);
}
return temp;
}
public void odswiez(RealVector v)
{
int i = 0;
foreach (PodstElem e in elementyWektora)
{
e.setTekst(v[i].ToString("0.00"));
i++;
}
}
public void BlendAlphaCrossoverApplyTest() {
TestRandom random = new TestRandom();
RealVector parent1, parent2, expected, actual;
DoubleValue alpha;
bool exceptionFired;
// The following test is not based on published examples
random.Reset();
random.DoubleNumbers = new double[] { 0.5, 0.5, 0.5, 0.5, 0.5 };
alpha = new DoubleValue(0.5);
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
expected = new RealVector(new double[] { 0.3, 0.15, 0.3, 0.35, 0.45 });
actual = BlendAlphaCrossover.Apply(random, parent1, parent2, alpha);
Assert.IsTrue(Auxiliary.RealVectorIsAlmostEqualByPosition(actual, expected));
// The following test is not based on published examples
random.Reset();
random.DoubleNumbers = new double[] { 0.25, 0.75, 0.25, 0.75, 0.25 };
alpha = new DoubleValue(0.25);
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
expected = new RealVector(new double[] { 0.225, 0.1875, 0.3, 0.4625, 0.1875 });
actual = BlendAlphaCrossover.Apply(random, parent1, parent2, alpha);
Assert.IsTrue(Auxiliary.RealVectorIsAlmostEqualByPosition(actual, expected));
// The following test is not based on published examples
random.Reset();
random.DoubleNumbers = new double[] { 0.25, 0.75, 0.25, 0.75, 0.25 };
alpha = new DoubleValue(-0.25); // negative values for alpha are not allowed
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
expected = new RealVector(new double[] { 0.225, 0.1875, 0.3, 0.4625, 0.1875 });
exceptionFired = false;
try {
actual = BlendAlphaCrossover.Apply(random, parent1, parent2, alpha);
}
catch (System.ArgumentException) {
exceptionFired = true;
}
Assert.IsTrue(exceptionFired);
// The following test is not based on published examples
random.Reset();
random.DoubleNumbers = new double[] { 0.25, 0.75, 0.25, 0.75, 0.25, .75 };
alpha = new DoubleValue(0.25);
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1, 0.9 }); // this parent is longer
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
expected = new RealVector(new double[] { 0.225, 0.1875, 0.3, 0.4625, 0.1875 });
exceptionFired = false;
try {
actual = BlendAlphaCrossover.Apply(random, parent1, parent2, alpha);
}
catch (System.ArgumentException) {
exceptionFired = true;
}
Assert.IsTrue(exceptionFired);
}
/** Instantiates the SVM model as the average model of the input SVMs. */
SVM(List<SVM> svmList)
{
int dim = svmList[0].GetDimension();
var w = new RealVector(dim);
foreach (SVM svm in svmList) {
w.Add(svm.getWeights());
}
this.weights = w.ScaleThis(1.0 / svmList.Count);
}
public static RealVector getColumn(int column, RealMatrix m)
{
RealVector v = new RealVector(m.Count());
int i = 0;
foreach (List<double> vecM in m)
{
v[i] = vecM[column];
i++;
}
return v;
}
/** Instantiates SVM from weights given as a string. */
SVM(String input)
{
var parsedInput = input.Split(' ').Select(Double.Parse).ToList();
double[] w = new double[parsedInput.Count];
int cnt = 0;
foreach (double coef in parsedInput) {
w[cnt++] = coef;
}
this.weights = new RealVector(w);
}
public static bool RealVectorIsAlmostEqualByPosition(RealVector p1, RealVector p2) {
bool equal = (p1.Length == p2.Length);
if (equal) {
for (int i = 0; i < p1.Length; i++) {
if (!p1[i].IsAlmost(p2[i])) {
equal = false;
break;
}
}
}
return equal;
}
public static double[] get_vector(RealVector src) {
IntPtr ptr = modshogunPINVOKE.RealVector_get_vector__SWIG_1(RealVector.getCPtr(src));
if (modshogunPINVOKE.SWIGPendingException.Pending) throw modshogunPINVOKE.SWIGPendingException.Retrieve();
int[] size = new int[1];
Marshal.Copy(ptr, size, 0, 1);
int len = size[0];
double[] ret = new double[len];
Marshal.Copy(new IntPtr(ptr.ToInt64() + Marshal.SizeOf(typeof(int))), ret, 0, len);
return ret;
}
public override void inicjalizacja(
RealVector wekC, List<String> wekCNazwy, List<String> bazaNaz, RealVector bazaWart,
RealMatrix m, RealVector prawaStr)
{
tab = new tabela.Tabela();
tab.setWielkoscIInit(wekC.Count,
bazaWart.Count);
tab.updateWektorC(wekC);
tab.updateWektorNazwC(wekCNazwy);
tab.updateWektorBazaNazwy(bazaNaz);
tab.updateWektorBazaWart(bazaWart);
tab.updateMtx(m);
tab.updatePrawaStronaWart(prawaStr);
}
public void UniformOnePositionManipulatorApplyTest() {
TestRandom random = new TestRandom();
RealVector parent, expected;
DoubleMatrix bounds;
// The following test is not based on published examples
random.Reset();
random.IntNumbers = new int[] { 3 };
random.DoubleNumbers = new double[] { 0.2 };
parent = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
expected = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.3, 0.1 });
bounds = new DoubleMatrix(new double[,] { { 0.2, 0.7 } });
UniformOnePositionManipulator.Apply(random, parent, bounds);
Assert.IsTrue(Auxiliary.RealVectorIsAlmostEqualByPosition(expected, parent));
}
public static int indexMinWartoscWektora(RealVector v)
{
if (v.Count == 0) return -1;
int index = 0;
double temp = v[0];
for (int i = 1; i < v.Count; i++)
{
if (v[i] < temp)
{
temp = v[i];
index = i;
}
}
return index;
}
bool typZadania; // 0 -max, 1-min
#endregion Fields
#region Constructors
public Algorytm(RealVector wekC,List<String> wekCNazwy, List<String> bazaNaz,RealVector bazaWart,
RealMatrix m,RealVector prawaStr,bool typ )
{
WektorC = wekC;
WektorNazwC = wekCNazwy;
BazaNazwy = bazaNaz;
BazaWartosci = bazaWart;
mtx = m;
prawaStrona = prawaStr;
typZadania = typ;
Z = new RealVector(WektorC.Count);
Zc = new RealVector(WektorC.Count);
obserw = new List<Obserwator>();
nrIteracji = 0;
nrKroku = 0;
}
public void SimulatedBinaryCrossoverApplyTest() {
TestRandom random = new TestRandom();
RealVector parent1, parent2, expected, actual;
DoubleValue contiguity;
bool exceptionFired;
// The following test is not based on published examples
random.Reset();
random.DoubleNumbers = new double[] { 0.3, 0.9, 0.7, 0.2, 0.8, 0.1, 0.2, 0.3, 0.4, 0.8, 0.7 };
contiguity = new DoubleValue(0.3);
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
expected = new RealVector(new double[] { 0.644880972204315, 0.0488239539275703, 0.3, 0.5, 0.1 });
actual = SimulatedBinaryCrossover.Apply(random, parent1, parent2, contiguity);
Assert.IsTrue(Auxiliary.RealVectorIsAlmostEqualByPosition(actual, expected));
// The following test is not based on published examples
random.Reset();
random.DoubleNumbers = new double[] { 0.3, 0.9, 0.7, 0.2, 0.8, 0.1, 0.2, 0.3, 0.4, 0.8, 0.7 };
contiguity = new DoubleValue(0.3);
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1, 0.9 }); // this parent is longer
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
exceptionFired = false;
try {
actual = SimulatedBinaryCrossover.Apply(random, parent1, parent2, contiguity);
}
catch (System.ArgumentException) {
exceptionFired = true;
}
Assert.IsTrue(exceptionFired);
// The following test is not based on published examples
random.Reset();
random.DoubleNumbers = new double[] { 0.3, 0.9, 0.7, 0.2, 0.8, 0.1, 0.2, 0.3, 0.4, 0.8, 0.7 };
contiguity = new DoubleValue(-0.3); // contiguity < 0
parent1 = new RealVector(new double[] { 0.2, 0.2, 0.3, 0.5, 0.1 });
parent2 = new RealVector(new double[] { 0.4, 0.1, 0.3, 0.2, 0.8 });
exceptionFired = false;
try {
actual = SimulatedBinaryCrossover.Apply(random, parent1, parent2, contiguity);
}
catch (System.ArgumentException) {
exceptionFired = true;
}
Assert.IsTrue(exceptionFired);
}
public RealVector(RealVector orig) : this(modshogunPINVOKE.new_RealVector__SWIG_5(RealVector.getCPtr(orig)), true) {
if (modshogunPINVOKE.SWIGPendingException.Pending) throw modshogunPINVOKE.SWIGPendingException.Retrieve();
}
/// <summary>
/// Evaluates the test function for a specific <paramref name="point"/>.
/// </summary>
/// <remarks>Calls <see cref="Apply"/>.</remarks>
/// <param name="point">N-dimensional point for which the test function should be evaluated.</param>
/// <returns>The result value of the Schwefel function at the given point.</returns>
public override double Evaluate(RealVector point)
{
return(Apply(point));
}
public virtual void updateStep6(RealVector nBazaWart,
List<String> nBazaNazwa)
{
}
public virtual void updateStep7(RealVector pStrona, RealMatrix mtx)
{
}
public virtual void updateStep1(RealVector wektorZ)
{
}
public virtual void updateStep2(RealVector wektorZc)
{
}
public virtual void inicjalizacja(RealVector wekC, List<String> wekCNazwy, List<String> bazaNaz, RealVector bazaWart,
RealMatrix m, RealVector prawaStr)
{
}
protected abstract double G(RealVector y);
private double[] Penalize(RealVector x, RealVector t, IEnumerable <double> fitness)
{
var penalty = x.Zip(t, (a, b) => (a - b) * (a - b)).Sum() * 1E-6;
return(fitness.Select((v, i) => Problem.Maximization[i] ? v - penalty : v + penalty).ToArray());
}
public RealVector getPrawaStrona()
{
RealVector temp = new RealVector();
foreach(Funkcja e in ograniczenia)
temp.Add(double.Parse(e.getPrawaStrona()));
return temp;
}
internal static HandleRef getCPtr(RealVector obj) {
return (obj == null) ? new HandleRef(null, IntPtr.Zero) : obj.swigCPtr;
}
// public bool getTyp() { return getFunkcjaCelu().getTypFunkcji(); }
public RealMatrix getMtx()
{
RealMatrix temp = new RealMatrix();
foreach(Funkcja e in ograniczenia){
RealVector t = new RealVector();
for (int i = 0; i <e.getWspZmiennych().Count; i++) {
t.Add(double.Parse(e.getWspZmiennych()[i]));
}
temp.Add(t);
}
return temp;
}
public double[] Evaluate(RealVector individual)
{
return(TestFunction.Evaluate(individual, Objectives));
}