public void Fill(AmazonS3Client client, string bucket, Vendors vendor, int buildingId)
{
_pregnancyConcepts = new PregnancyConcepts();
var lookup = new Lookup();
var prefix =
$"{vendor}/{buildingId}/Lookups/PregnancyDrug.txt";
Console.WriteLine(bucket + "/" + prefix);
lookup.Fill(client, bucket, prefix);
_lookups.Add("PregnancyDrug", lookup);
}
public void Fill(bool forLookup)
{
_genderConcepts = new GenderLookup();
_genderConcepts.Load();
_pregnancyConcepts = new PregnancyConcepts();
using (var client = new AmazonS3Client(Settings.Current.S3AwsAccessKeyId,
Settings.Current.S3AwsSecretAccessKey, Amazon.RegionEndpoint.USEast1))
{
foreach (var qd in Settings.Current.Building.SourceQueryDefinitions)
{
Load(client, qd.ConditionOccurrence);
Load(client, qd.DrugExposure);
Load(client, qd.ProcedureOccurrence);
Load(client, qd.Observation);
Load(client, qd.VisitOccurrence);
//Load(client, qd.CareSites);
//Load(client, qd.Providers);
Load(client, qd.Death);
Load(client, qd.Measurement);
Load(client, qd.DeviceExposure);
Load(client, qd.Note);
Load(client, qd.VisitCost);
Load(client, qd.ProcedureCost);
Load(client, qd.DeviceCost);
Load(client, qd.ObservationCost);
Load(client, qd.MeasurementCost);
Load(client, qd.DrugCost);
}
var lookup = new Lookup();
var prefix =
$"{Settings.Current.Building.Vendor}/{Settings.Current.Building.Id}/Lookups/PregnancyDrug.txt";
Console.WriteLine(Settings.Current.Bucket + "/" + prefix);
lookup.Fill(client, Settings.Current.Bucket, prefix);
_lookups.Add("PregnancyDrug", lookup);
}
}
/// <summary>
/// Fill vocabulary for source to conceptId mapping
/// </summary>
/// <param name="forLookup">true - fill vocab. for: CareSites, Providers, Locations; false - rest of us</param>
public void Fill(bool forLookup, bool readFromS3)
{
_genderConcepts = new GenderLookup();
_genderConcepts.Load();
_pregnancyConcepts = new PregnancyConcepts();
foreach (var qd in Settings.Current.Building.SourceQueryDefinitions)
{
if (forLookup)
{
Load(qd.CareSites);
Load(qd.Providers);
Load(qd.Locations);
}
else
{
Load(qd.Persons);
Load(qd.ConditionOccurrence);
Load(qd.DrugExposure);
Load(qd.ProcedureOccurrence);
Load(qd.Observation);
Load(qd.VisitOccurrence);
Load(qd.VisitDetail);
Load(qd.Death);
Load(qd.Measurement);
Load(qd.DeviceExposure);
Load(qd.Note);
Load(qd.VisitCost);
Load(qd.ProcedureCost);
Load(qd.DeviceCost);
Load(qd.ObservationCost);
Load(qd.MeasurementCost);
Load(qd.DrugCost);
}
}
LoadPregnancyDrug();
}