public SpatialBayes(List <List <double> > ls, double bgFactor, string name, ModelDisplayType dTy)
: base(dTy, name)
{
startIndex = 1;
localBg = bgFactor;
data = ls;
ProcessData();
}
public BayesPerBase(List <List <double> > bases, string name, ModelDisplayType dtype, bool fromStart)
: base(dtype, name)
{
FromStart = fromStart;
data = bases;
BGFactor = makeBgFactor(data);
ProcessData();
}
//double stdSize;
public DoublesHisto(List <double> l, int buckets, string name, bool isMulti, ModelDisplayType dtype)
: base(dtype, name)
{
totalHistPosition = 1;
totalHistos = 1;
bcount = buckets;
l.Sort();
data = new List <double> ();
data.AddRange(l);
totalCount = data.Count;
avg = Statistics.Mean(data);
stdDev = Statistics.StandardDeviation(data);
if (!isMulti)
{
CountToBins();
}
}
public MultiBayes(Dictionary <string, List <List <double> > > dict, ModelDisplayType mTy, MultiBayesLayout lyo)
{
layout = lyo;
histos = new List <GraphingClass> ();
if (layout == MultiBayesLayout.Sequential)
{
double bgFac = GetMegaBg(dict);
int cnt = 0;
foreach (KeyValuePair <string, List <List <double> > > kvp in dict)
{
DivSize = kvp.Value.Count;
int tot = kvp.Value.Count;
histos.Add(new SpatialBayes(kvp.Value, bgFac, tot * cnt, kvp.Key, mTy));
cnt += 1;
}
}
else
{
if (dict.Count == 1)
{
foreach (KeyValuePair <string, List <List <double> > > kvp in dict)
{
histos.Add(new SpatialBayes(kvp.Value, kvp.Key, mTy));
}
}
else
{
double bgFac = GetMegaBg(dict);
foreach (KeyValuePair <string, List <List <double> > > kvp in dict)
{
histos.Add(new SpatialBayes(kvp.Value, bgFac, kvp.Key, mTy));
}
}
}
}
public MultiHisto(Dictionary <string, List <double> > dict, int buckets, ModelDisplayType dtype) : base()
{
histos = new List <GraphingClass> ();
double fullMax = 0;
double fullMin = 999999999;
double stdMin = 999999999;
double stdMax = 0;
foreach (KeyValuePair <string, List <double> > kvp in dict)
{
if (kvp.Value.Count > 5)
{
DoublesHisto h = new DoublesHisto(kvp.Value, buckets, kvp.Key, true, dtype);
histos.Add(h);
fullMax = Math.Max(h.GetLocalMax(), fullMax);
fullMin = Math.Min(h.GetLocalMin(), fullMin);
stdMax = Math.Max(h.GetPlusTwoStdDevs(), stdMax);
stdMin = Math.Min(h.GetMinusTwoStdDevs(), stdMin);
}
}
stdMin = Math.Max(0, stdMin);
List <double> increments = DoublesHisto.CreateBoundaryIncrements(fullMin, fullMax, stdMin, stdMax, buckets);
int pos = 1;
int cnt = histos.Count;
foreach (DoublesHisto h in histos)
{
h.SetBoundaryIncrements(increments);
h.CountToBins(fullMin);
h.SetTotalHistos(cnt, pos);
pos++;
}
}
public GraphingClass(ModelDisplayType ty, string name)
{
dType = ty;
lineName = name;
}
public RankLine(Dictionary <string, List <double> > ranks, string name, ModelDisplayType dtype)
: base(dtype, name)
{
Data = ranks;
points = CalculateHistoCoords();
}
