public override void InitializeSites(string initialCommunitiesText, string initialCommunitiesMap, ICore modelCore)
{
ModelCore.UI.WriteLine(" Loading initial communities from file \"{0}\" ...", initialCommunitiesText);
Landis.Library.InitialCommunities.DatasetParser parser = new Landis.Library.InitialCommunities.DatasetParser(Timestep, ModelCore.Species);
Landis.Library.InitialCommunities.IDataset communities = Landis.Data.Load <Landis.Library.InitialCommunities.IDataset>(initialCommunitiesText, parser);
ModelCore.UI.WriteLine(" Reading initial communities map \"{0}\" ...", initialCommunitiesMap);
IInputRaster <uintPixel> map;
map = ModelCore.OpenRaster <uintPixel>(initialCommunitiesMap);
using (map)
{
uintPixel pixel = map.BufferPixel;
foreach (Site site in ModelCore.Landscape.AllSites)
{
map.ReadBufferPixel();
uint mapCode = pixel.MapCode.Value;
if (!site.IsActive)
{
continue;
}
//if (!modelCore.Ecoregion[site].Active)
// continue;
//modelCore.Log.WriteLine("ecoregion = {0}.", modelCore.Ecoregion[site]);
ActiveSite activeSite = (ActiveSite)site;
initialCommunity = communities.Find(mapCode);
if (initialCommunity == null)
{
throw new ApplicationException(string.Format("Unknown map code for initial community: {0}", mapCode));
}
InitializeSite(activeSite);
}
}
}