private void CreateFeatureMapImage(LcMsRun run, string featuresFilePath, string imgFilePath)
{
var map = new LcMsFeatureMap(run, featuresFilePath, Math.Max(0, Parameters.MinSearchMass - 500), Parameters.MaxSearchMass);
map.SaveImage(imgFilePath);
Console.WriteLine(@" - Feature map image output: {0}", imgFilePath);
}
private void FeatureMapGeneration()
{
var resultsFilePath = Path.Combine(Path.GetTempPath(), Path.GetFileNameWithoutExtension(mFeatureMapPbfFile) + "_FeatureMap.png");
var map = new LcMsFeatureMap(PbfLcMsRun.GetLcMsRun(mFeatureMapPbfFile), mFeatureMapResultsFile, 2000, 50000);
map.SaveImage(resultsFilePath);
Console.WriteLine("Image saved to " + resultsFilePath);
}
public void TestFeatureMapGeneration()
{
Console.WriteLine("Testing Working");
var methodName = MethodBase.GetCurrentMethod().Name;
TestUtils.ShowStarting(methodName);
const string rawFile = @"\\protoapps\UserData\Jungkap\Joshua\testData\QC_Shew_Intact_26Sep14_Bane_C2Column3.pbf";
const string testFile = @"\\protoapps\UserData\Jungkap\Joshua\FeatureMap\QC_Shew_Intact_26Sep14_Bane_C2Column3.ms1ft";
const string outputFile = @"D:\MassSpecFiles\training\raw\";
var map = new LcMsFeatureMap(PbfLcMsRun.GetLcMsRun(rawFile), testFile, 2000, 50000);
map.SaveImage(outputFile + "test.png");
}
public void TestFeatureMapGeneration()
{
Console.WriteLine("Testing Working");
var methodName = MethodBase.GetCurrentMethod().Name;
TestUtils.ShowStarting(methodName);
const string testFile = @"\\protoapps\UserData\Jungkap\Joshua\FeatureMap\QC_Shew_Intact_26Sep14_Bane_C2Column3.ms1ft";
const string outputFile = @"\\protoapps\UserData\Jungkap\Joshua\";
var map = new LcMsFeatureMap(testFile, 185);
map.SaveImage(outputFile + "test.png", 100);
}
