private bool ProcessOneFile(ImportContext importContext)
{
var processInfos = _processControl.GetProcessInfos(importContext);
if (processInfos.Any(procInfo => !_processControl.RunProcess(procInfo)))
{
return(false);
}
_totalImportCount++;
return(true);
}
public bool ReadLastAcquiredFileDate(IAutoQCLogger logger, IProcessControl processControl)
{
logger.Log("Getting the acquisition date on the newest file imported into the Skyline document.", 1, 0);
var exeDir = Path.GetDirectoryName(Assembly.GetExecutingAssembly().Location);
if (exeDir == null)
{
logger.LogError("Cound not get path to the Skyline report file");
return(false);
}
var skyrFile = Path.Combine(exeDir, "FileAcquisitionTime.skyr");
var reportFile = Path.Combine(SkylineFileDir, "AcquisitionTimes.csv");
// Export a report from the given Skyline file
var args =
string.Format(
@" --in=""{0}"" --report-conflict-resolution=overwrite --report-add=""{1}"" --report-name=""{2}"" --report-file=""{3}""",
SkylineFilePath, skyrFile, "AcquisitionTimes", reportFile);
var procInfo = new ProcessInfo(AutoQCForm.SkylineRunnerPath, AutoQCForm.SKYLINE_RUNNER, args, args);
if (!processControl.RunProcess(procInfo))
{
logger.LogError("Error getting the last acquired file date from the Skyline document.");
return(false);
}
// Read the exported report to get the last AcquiredTime for imported results in the Skyline doucment.
if (!File.Exists(reportFile))
{
logger.LogError("Could not find report outout {0}", reportFile);
return(false);
}
try
{
LastAcquiredFileDate = GetLastAcquiredFileDate(reportFile, logger);
if (!LastAcquiredFileDate.Equals(DateTime.MinValue))
{
logger.Log("The most recent acquisition date in the Skyline document is {0}", LastAcquiredFileDate);
}
else
{
logger.Log("The Skyline document does not have any imported results.");
}
}
catch (IOException e)
{
logger.LogError("Exception reading file {0}. Exception details are: ", reportFile);
logger.LogException(e);
return(false);
}
return(true);
}
public bool ReadLastAcquiredFileDate(IAutoQCLogger logger, IProcessControl processControl)
{
logger.Log("Getting the acquisition date on the newest file imported into the Skyline document.", 1, 0);
var exeDir = Path.GetDirectoryName(Assembly.GetExecutingAssembly().Location);
if (exeDir == null)
{
logger.LogError("Cound not get path to the Skyline report file");
return false;
}
var skyrFile = Path.Combine(exeDir, "FileAcquisitionTime.skyr");
var reportFile = Path.Combine(SkylineFileDir, "AcquisitionTimes.csv");
// Export a report from the given Skyline file
var args =
string.Format(
@" --in=""{0}"" --report-conflict-resolution=overwrite --report-add=""{1}"" --report-name=""{2}"" --report-file=""{3}""",
SkylineFilePath, skyrFile, "AcquisitionTimes", reportFile);
var procInfo = new ProcessInfo(AutoQCForm.SkylineRunnerPath, AutoQCForm.SKYLINE_RUNNER, args, args);
if (!processControl.RunProcess(procInfo))
{
logger.LogError("Error getting the last acquired file date from the Skyline document.");
return false;
}
// Read the exported report to get the last AcquiredTime for imported results in the Skyline doucment.
if (!File.Exists(reportFile))
{
logger.LogError("Could not find report outout {0}", reportFile);
return false;
}
try
{
LastAcquiredFileDate = GetLastAcquiredFileDate(reportFile, logger);
if (!LastAcquiredFileDate.Equals(DateTime.MinValue))
{
logger.Log("The most recent acquisition date in the Skyline document is {0}", LastAcquiredFileDate);
}
else
{
logger.Log("The Skyline document does not have any imported results.");
}
}
catch (IOException e)
{
logger.LogError("Exception reading file {0}. Exception details are: ", reportFile);
logger.LogException(e);
return false;
}
return true;
}
