public override SMIDataChunk DoGetChunk(ICacheFetchRequest cacheRequest, IDataLoadEventListener listener, GracefulCancellationToken cancellationToken)
{
#region assigns
var dicomConfiguration = GetConfiguration();
var requestSender = new DicomRequestSender(dicomConfiguration, listener);
var dateFrom = Request.Start;
var dateTo = Request.End;
var hasTransferTimedOut = false;
CachingSCP.LocalAet = LocalAETitle;
CachingSCP.Listener = listener;
if (PatientIdWhitelistColumnInfo != null && !IgnoreWhiteList)
{
GetWhitelist(listener);
}
//temp dir
var cacheDir = new LoadDirectory(Request.CacheProgress.LoadProgress.LoadMetadata.LocationOfFlatFiles).Cache;
var cacheLayout = new SMICacheLayout(cacheDir, new SMICachePathResolver(Modality));
Chunk = new SMIDataChunk(Request)
{
FetchDate = dateFrom,
Modality = Modality,
Layout = cacheLayout
};
// IOrder order = new ItemsBasedOrder(dateFrom, dateTo, PlacementMode.PlaceThenFill,OrderLevel, listener);
IOrder order = new HierarchyBasedOrder(dateFrom, dateTo, PlacementMode.PlaceThenFill, OrderLevel, listener);
IPicker picker = null;
var pickerFilled = false;
var transferTimeOutTimer = new Timer(dicomConfiguration.TransferTimeOutInMilliseconds);
transferTimeOutTimer.Elapsed += (source, eventArgs) =>
{
hasTransferTimedOut = true;
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Information, "Transfer Timeout Exception Generated"));
throw new TimeoutException("Transfer Timeout Exception");
};
CachingSCP.OnEndProcessingCStoreRequest = (storeRequest, storeResponse) =>
{
var item = new Item(storeRequest);
transferTimeOutTimer.Reset();
if (picker != null)
{
picker.Fill(item);
pickerFilled = picker.IsFilled();
}
SaveSopInstance(storeRequest, cacheLayout, listener);
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Debug,
"Stored sopInstance" + storeRequest.SOPInstanceUID.UID));
};
#endregion
//helps with tyding up resources if we abort or through an exception and neatly avoids -> Access to disposed closure
using (var server = (DicomServer <CachingSCP>)DicomServer.Create <CachingSCP>(dicomConfiguration.LocalAetUri.Port))
{
try
{
// Find a list of studies
#region Query
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Information,
"Requesting Studies from " + dateFrom + " to " + dateTo));
var studyUids = new List <string>();
var request = CreateStudyRequestByDateRangeForModality(dateFrom, dateTo, Modality);
request.OnResponseReceived += (req, response) =>
{
if (Filter(_whitelist, response))
{
studyUids.Add(response.Dataset.GetSingleValue <string>(DicomTag.StudyInstanceUID));
}
};
requestSender.ThrottleRequest(request, cancellationToken);
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Debug,
"Total filtered studies for " + dateFrom + " to " + dateTo + "is " + studyUids.Count));
foreach (var studyUid in studyUids)
{
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Debug,
"Sending series query for study" + studyUid));
var seriesUids = new List <string>();
request = CreateSeriesRequestByStudyUid(studyUid);
request.OnResponseReceived += (req, response) =>
{
if (response.Dataset == null)
{
return;
}
var seriesInstanceUID = response.Dataset.GetSingleValue <string>(DicomTag.SeriesInstanceUID);
if (seriesInstanceUID != null)
{
seriesUids.Add(seriesInstanceUID);
}
};
requestSender.ThrottleRequest(request, cancellationToken);
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Debug,
"Total series for " + studyUid + "is " + seriesUids.Count));
foreach (var seriesUid in seriesUids)
{
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Debug,
"Sending image query for series" + seriesUid));
request = CreateSopRequestBySeriesUid(seriesUid);
int imageCount = 0;
request.OnResponseReceived += (req, response) =>
{
if (response.Dataset == null)
{
return;
}
var sopUid = response.Dataset.GetSingleValue <string>(DicomTag.SOPInstanceUID);
var patientId = response.Dataset.GetSingleValue <string>(DicomTag.PatientID);
if (sopUid != null && patientId != null)
{
//Place order
order.Place(patientId, studyUid, seriesUid, sopUid);
imageCount++;
}
};
requestSender.ThrottleRequest(request, cancellationToken);
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Debug,
"Successfully finished image query for " + seriesUid + " Toal images in series = " + imageCount));
}
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Debug,
"Successfully finished series query for " + studyUid));
}
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Debug,
"Successfully finished query phase"));
#endregion
//go and get them
#region Retrieval
var transferStopwatch = new Stopwatch();
//start building request to fill orders
//get the picker - the for loop avoids sleeping after all the transfers have finished and attempting dequeue on empty queue
for (int delay = 0, transferTimerPollingPeriods;
order.HasNextPicker() && !hasTransferTimedOut;
delay = (int)(dicomConfiguration.TransferDelayFactor * transferTimerPollingPeriods * dicomConfiguration.TransferPollingInMilliseconds)
+ dicomConfiguration.TransferCooldownInMilliseconds
)
{
transferStopwatch.Restart();
//delay value in mills
if (delay != 0)
{
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Information,
"Transfers sleeping for " + delay / 1000 + "seconds"));
Task.Delay(delay, cancellationToken.AbortToken).Wait(cancellationToken.AbortToken);
}
//set this here prior to request
pickerFilled = false;
transferTimerPollingPeriods = 0;
//get next picker
picker = order.NextPicker();
// A CMove will be performed if the storescp exists and this storescp is known to the QRSCP:
var cMoveRequest = picker.GetDicomCMoveRequest(LocalAETitle);
/* this won't work which means we cannot enforce (low) priority
* cMoveRequest.Priority=DicomPriority.Low;*/
cMoveRequest.OnResponseReceived += (requ, response) =>
{
if (response.Status.State == DicomState.Pending)
{
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Debug,
"Request: " + requ.ToString() + "items remaining: " + response.Remaining));
}
else if (response.Status.State == DicomState.Success)
{
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Debug,
"Request: " + requ.ToString() + "completed successfully"));
}
else if (response.Status.State == DicomState.Failure)
{
listener.OnNotify(this,
new NotifyEventArgs(ProgressEventType.Debug,
"Request: " + requ.ToString() + "failed to download: " + response.Failures));
}
};
listener.OnProgress(this,
new ProgressEventArgs(CMoveRequestToString(cMoveRequest),
new ProgressMeasurement(picker.Filled(), ProgressType.Records, picker.Total()),
transferStopwatch.Elapsed));
//do not use requestSender.ThrottleRequest(cMoveRequest, cancellationToken);
//TODO is there any need to throtttle this request given its lifetime
DicomClient client = new DicomClient();
requestSender.ThrottleRequest(cMoveRequest, client, cancellationToken);
transferTimeOutTimer.Reset();
while (!pickerFilled && !hasTransferTimedOut)
{
Task.Delay(dicomConfiguration.TransferPollingInMilliseconds, cancellationToken.AbortToken)
.Wait(cancellationToken.AbortToken);
transferTimerPollingPeriods++;
}
transferTimeOutTimer.Stop();
client.Release();
listener.OnProgress(this,
new ProgressEventArgs(CMoveRequestToString(cMoveRequest),
new ProgressMeasurement(picker.Filled(), ProgressType.Records, picker.Total()),
transferStopwatch.Elapsed));
}
#endregion
}
finally
{
server.Stop();
}
}
return(Chunk);
}
