public PairwiseSequenceAlignmentProviderSpecs()
{
_seq1 = new Sequence(Alphabets.DNA, "GGCCC");
_seq2 = new Sequence(Alphabets.RNA, "AACCC");
var sequenceProvider = MockRepository.GenerateStub <ISequenceProvider>();
sequenceProvider.Stub(x => x.Provide(null, null)).IgnoreArguments().Return(new[] { _seq1, _seq2 });
_sut = new PairwiseSequenceAlignmentProvider(sequenceProvider);
}
public PairwaiseModule(IPairwiseSequenceProvider provider)
{
_provider = provider;
Post["/Align/Pairwise/Metadata"] = _ =>
{
var data = (SequenceModel[])NancyExtensionToPost.GetData <SequenceModel[]>(Request.Query);
return(Response.AsJson(_provider.GetMetadata(data)));
};
}
