private void UpdateSegment(ILookup <string, ChromosomeSegment> segmentMap, Kit kit)
{
var kitSegments = segmentMap[NormalizeName(kit.Name)];
if (!kitSegments.Any())
{
_logger.LogInfo($"Warning: No segments could be found for {kit.Name}, falling back to fetching details...");
var details = _service.GetMatchDetails(kit).Result;
kitSegments = details.FFCMData.Select(s => new ChromosomeSegment
{
Chromosome = s.Chromosome,
StartLocation = s.P1,
EndLocation = s.P2,
Centimorgans = s.Cm,
MatchingSnps = s.Snps
});
_logger.LogInfo($"Fetching {kitSegments.Count()} segments from details");
}
foreach (var kitSegment in kitSegments)
{
kit.AddSegmentMatch(kitSegment.Chromosome,
kitSegment.StartLocation,
kitSegment.EndLocation,
kitSegment.MatchingSnps);
}
}
public async Task <MatchDetails> GetMatchDetails(IKitIdentity match)
{
if (TryGetStoredResult("GetMatchDetails", out MatchDetails cached, match.ResultId2))
{
return(cached);
}
var result = await _service.GetMatchDetails(match);
StoreResult("GetMatchDetails", result, match.ResultId2);
return(result);
}
