internal static GenomeType GetGenomeType([NotNull] this IContigInfo variantContig)
{
var isUcsc = variantContig.ToUcscStyle().Name == variantContig.Name;
var isGrch37 = variantContig.ToGrchStyle().Name == variantContig.Name;
if (isUcsc && isGrch37)
{
return(GenomeType.Unknown); // means not found in either.
}
return(isUcsc ? GenomeType.Ucsc : GenomeType.Grch);
}
public void AddFalseCount(IContigInfo contig, IInterval <uint> interval) => _falseCount.GetOrAdd(contig, _ => MergedIntervalTree.Create <uint>()).Add(interval);
