public void ValidateEBIWuBlastManadatoryParams()
{
// Gets the search query parameter and their values.
string querySequence = Utility._xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.QuerySequency);
string queryDatabaseValue = Utility._xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.DatabaseValue);
string queryProgramValue = Utility._xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.ProgramValue);
string queryDatabaseParameter = Utility._xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.DatabaseParameter);
string queryProgramParameter = Utility._xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.ProgramParameter);
string emailParameter = Utility._xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.Emailparameter);
string email = Utility._xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.EmailAdress);
// Set Service confiruration parameters true.
IBlastServiceHandler service = new EbiWuBlastHandler();
ConfigParameters configParameters = new ConfigParameters();
configParameters.UseBrowserProxy = true;
service.Configuration = configParameters;
// Create search parameters object.
BlastParameters ebiParams = new BlastParameters();
// Add mandatory parameter values to search query parameters.
//ebiParams.Add(querySequenceParameter, querySequence);
ebiParams.Add(queryDatabaseParameter, queryDatabaseValue);
ebiParams.Add(queryProgramParameter, queryProgramValue);
ebiParams.Add(emailParameter, email);
// Validate search query parameters.
ParameterValidationResult validateParameters =
EbiWuBlastHandler.ValidateParameters(ebiParams);
bool result = validateParameters.IsValid;
Assert.IsTrue(result);
// Assert.IsTrue(ebiParams.Settings.ContainsValue(querySequence));
Assert.IsTrue(ebiParams.Settings.ContainsValue(queryDatabaseValue));
Assert.IsTrue(ebiParams.Settings.ContainsValue(queryProgramValue));
Assert.IsTrue(ebiParams.Settings.ContainsValue(email));
Assert.AreEqual(ebiParams.Settings.Count, 3);
// Logs to the NUnit GUI (Console.Out) window
Console.WriteLine(string.Format(null,
"Ebi Blast BVT: Query Sequence{0} is as expected.", querySequence));
Console.WriteLine(string.Format(null,
"Ebi Blast BVT: DataBase Value{0} is as expected.", queryDatabaseValue));
Console.WriteLine(string.Format(null,
"Ebi Blast BVT: Program Value {0} is as expected.", queryProgramValue));
}
public void ValidateEBIWuBlastManadatoryParams()
{
// Gets the search query parameter and their values.
string querySequence = utilityObj.xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.QuerySequency);
string queryDatabaseValue = utilityObj.xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.DatabaseValue);
string queryProgramValue = utilityObj.xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.ProgramValue);
string queryDatabaseParameter = utilityObj.xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.DatabaseParameter);
string queryProgramParameter = utilityObj.xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.ProgramParameter);
string emailParameter = utilityObj.xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.Emailparameter);
string email = utilityObj.xmlUtil.GetTextValue(
Constants.BlastParametersNode, Constants.EmailAdress);
string alphabetName = utilityObj.xmlUtil.GetTextValue(
Constants.EbiAsynchronousResultsNode, Constants.AlphabetNameNode);
// Set Service confiruration parameters true.
IBlastServiceHandler service = null;
try
{
service = new EbiWuBlastHandler();
ConfigParameters configParameters = new ConfigParameters();
configParameters.UseBrowserProxy = true;
service.Configuration = configParameters;
// Create search parameters object.
BlastParameters ebiParams = new BlastParameters();
// Add mandatory parameter values to search query parameters.
//ebiParams.Add(querySequenceParameter, querySequence);
ebiParams.Add(queryDatabaseParameter, queryDatabaseValue);
ebiParams.Add(queryProgramParameter, queryProgramValue);
ebiParams.Add(emailParameter, email);
ebiParams.Add("SequenceType",
alphabetName.ToLower(CultureInfo.CurrentCulture).Replace("ambiguous", ""));
// Validate search query parameters.
ParameterValidationResult validateParameters =
EbiWuBlastHandler.ValidateParameters(ebiParams);
bool result = validateParameters.IsValid;
Assert.IsTrue(result);
// Assert.IsTrue(ebiParams.Settings.ContainsValue(querySequence));
Assert.IsTrue(ebiParams.Settings.ContainsValue(queryDatabaseValue));
Assert.IsTrue(ebiParams.Settings.ContainsValue(queryProgramValue));
Assert.IsTrue(ebiParams.Settings.ContainsValue(email));
Assert.AreEqual(ebiParams.Settings.Count, 4);
// Logs to the VSTest GUI (Console.Out) window
Console.WriteLine(string.Format((IFormatProvider)null,
"Ebi Blast BVT: Query Sequence{0} is as expected.", querySequence));
Console.WriteLine(string.Format((IFormatProvider)null,
"Ebi Blast BVT: DataBase Value{0} is as expected.", queryDatabaseValue));
Console.WriteLine(string.Format((IFormatProvider)null,
"Ebi Blast BVT: Program Value {0} is as expected.", queryProgramValue));
}
catch (Exception ex) { Assert.Fail(ex.Message); }
finally
{
if (service != null)
{
((IDisposable)service).Dispose();
}
}
}
