public override void ImportPeaks(List <DeconTools.Backend.DTO.MSPeakResult> peakList)
{
this.m_peakIndex = 0;
var oldPeakResults = new DeconToolsV2.Results.clsTransformResults();
Engine.Results.LcmsPeak[] importedPeaks = null;
try
{
oldPeakResults.ReadResults(this.m_filename);
oldPeakResults.GetRawData(out importedPeaks);
}
catch (Exception ex)
{
throw ex;
}
foreach (var p in importedPeaks)
{
var peak = ConvertDecon2LSPeakToPeakResult(p);
m_peakIndex++;
peakList.Add(peak);
}
}
public void SetData(DeconToolsV2.Results.clsTransformResults results)
{
try
{
mobj_results = results;
marr_peaks = new Engine.Results.LcmsPeak[1];
var min_intensity = float.MaxValue;
var max_intensity = float.MinValue;
mobj_results.GetRawData(out marr_peaks);
if (marr_peaks.Length == 0)
{
return;
}
var myComparer = new clsRawDataComparer();
Array.Sort(marr_peaks, myComparer);
min_intensity = (float)marr_peaks[0].Intensity;
max_intensity = (float)marr_peaks[marr_peaks.Length - 1].Intensity;
var startIndex = 0;
if (min_intensity < mfltMinIntensity)
{
while (startIndex < marr_peaks.Length && marr_peaks[startIndex].Intensity < mfltMinIntensity)
{
startIndex++;
}
}
if (startIndex == marr_peaks.Length)
{
return;
}
if (max_intensity < 0)
{
max_intensity = 1f;
}
marr_scans = new float [marr_peaks.Length - startIndex];
marr_mzs = new float [marr_peaks.Length - startIndex];
marr_intensities = new float [marr_peaks.Length - startIndex];
for (var i = startIndex; i < marr_peaks.Length; i++)
{
marr_scans[i - startIndex] = Convert.ToSingle(marr_peaks[i].ScanNum);
marr_mzs[i - startIndex] = (float)marr_peaks[i].Mz;
marr_intensities[i - startIndex] = (float)marr_peaks[i].Intensity;
}
mctl_rawdata.SetData(marr_scans, marr_mzs, marr_intensities, min_intensity, max_intensity);
var mono_masses = results.MonoMasses;
var charges = results.Charges;
var scans = results.Scans;
mctl_rawdata.SetDeisotopedData(scans, mono_masses, charges);
this.Text = mobj_results.FileName;
var slashIndex = mobj_results.FileName.LastIndexOf("\\") + 1;
this.CategorizedText = mobj_results.FileName.Substring(slashIndex, mobj_results.FileName.Length - slashIndex);
}
catch (Exception ex)
{
MessageBox.Show(this, ex.Message + ex.StackTrace);
}
}
