/// <summary> /// /// </summary> /// <param name="args"></param> static int Main(string[] args) { var handle = System.Diagnostics.Process.GetCurrentProcess().MainWindowHandle; SetConsoleMode(handle, ENABLE_EXTENDED_FLAGS); try { CommandLineProcessor.ProcessCommandLineArguments(args, m_config); var controller = new AnalysisController(); var result = controller.StartMultiAlign(m_config, m_reportCreator); if (result != 0) { Logger.PrintMessage(""); Logger.PrintMessage("ANALYSIS FAILED"); } else { Logger.PrintMessage(""); Logger.PrintMessage("ANALYSIS SUCCESS"); } return(result); } catch (Exception ex) { Logger.PrintMessage("Unhandled Error: " + ex.Message); var innerEx = ex.InnerException; while (innerEx != null) { Logger.PrintMessage("Inner Exception: " + innerEx.Message); innerEx = innerEx.InnerException; } Logger.PrintMessage("Stack: " + ex.StackTrace); Logger.PrintMessage(""); Logger.PrintMessage("ANALYSIS FAILED"); return(1); } }