/// <summary>
/// Processes the model configuration.
/// </summary>
/// <param name="uploadQueueItem">The upload queue item.</param>
/// <param name="dicomFiles">The dicom files.</param>
/// <param name="queueTransaction">The queue transaction.</param>
/// <param name="clientConfiguration">The client configuration.</param>
/// <returns>The waitable task.</returns>
private async Task ProcessModelConfig(
IEnumerable <DicomFile> dicomFiles,
UploadQueueItem uploadQueueItem,
IQueueTransaction queueTransaction,
ClientAETConfig clientConfiguration)
{
var modelMatchResult = ApplyAETModelConfigProvider.ApplyAETModelConfig(clientConfiguration.Config.ModelsConfig, dicomFiles);
if (modelMatchResult.Matched)
{
var model = modelMatchResult.Result;
var queueItem = await StartSegmentationAsync(model.ChannelData, uploadQueueItem, model.ModelId, model.TagReplacements.ToArray(), clientConfiguration).ConfigureAwait(false);
EnqueueMessage(queueItem, _downloadQueuePath, queueTransaction);
}
else
{
var failedDicomTags = modelMatchResult.GetDicomConstraintsDicomTags();
// Log all the tags that did not match
LogError(LogEntry.Create(AssociationStatus.UploadErrorTagsDoNotMatch,
uploadQueueItem: uploadQueueItem,
failedDicomTags: string.Join(",", failedDicomTags.Select(x => x.DictionaryEntry.Name))),
new ProcessorServiceException("Failed to find a model for the received Dicom data."));
}
}
/// <summary>
/// Clone this into a new instance of the <see cref="AETConfigModel"/> class, optionally replacing some properties.
/// </summary>
/// <param name="calledAET">Optional new CalledAET.</param>
/// <param name="callingAET">Optional new CallingAET.</param>
/// <param name="aetConfig">Optional new AETConfig.</param>
/// <returns>New AETConfigModel.</returns>
public AETConfigModel With(
string calledAET = null,
string callingAET = null,
ClientAETConfig aetConfig = null) =>
new AETConfigModel(
calledAET ?? CalledAET,
callingAET ?? CallingAET,
aetConfig ?? AETConfig);
/// <summary>
/// Initialize a new instance of the <see cref="AETConfigModel"/> class.
/// </summary>
/// <param name="calledAET">Called application entity title.</param>
/// <param name="callingAET">Calling application entity title.</param>
/// <param name="aetConfig">AET config.</param>
public AETConfigModel(
string calledAET,
string callingAET,
ClientAETConfig aetConfig)
{
CalledAET = calledAET;
CallingAET = callingAET;
AETConfig = aetConfig;
}
/// <summary>
/// Starts the segmentation task.
/// </summary>
/// <param name="channelData">The channel data.</param>
/// <param name="uploadQueueItem">The upload queue item.</param>
/// <param name="modelGuid">The model unique identifier.</param>
/// <param name="tagReplacements">The tag replacements.</param>
/// <param name="clientConfiguration">The client configuration.</param>
/// <returns>The queue item.</returns>
/// <exception cref="InvalidQueueDataException">If the result destination is not a valid AET.</exception>
private async Task <DownloadQueueItem> StartSegmentationAsync
(IEnumerable <ChannelData> channelData,
UploadQueueItem uploadQueueItem,
string modelGuid,
TagReplacement[] tagReplacements,
ClientAETConfig clientConfiguration)
{
if (clientConfiguration.Destination == null)
{
var exception = new ArgumentNullException("clientConfiguration.Destination",
"The result destination is null. The destination has not been configured.");
LogError(LogEntry.Create(AssociationStatus.UploadErrorDestinationEmpty, uploadQueueItem: uploadQueueItem),
exception);
throw exception;
}
// Validate the destination before uploading.
ValidateDicomEndpoint(uploadQueueItem, clientConfiguration.Destination);
LogInformation(LogEntry.Create(AssociationStatus.Uploading,
uploadQueueItem: uploadQueueItem,
modelId: modelGuid));
var referenceDicomFiles = channelData.First().DicomFiles.ToArray();
// Read all the bytes from the reference Dicom file and create new DICOM files with only the required DICOM tags
var referenceDicomByteArrays = referenceDicomFiles
.CreateNewDicomFileWithoutPixelData(
_innerEyeSegmentationClient.SegmentationAnonymisationProtocol.Select(x => x.DicomTagIndex.DicomTag));
// Start the segmentation
var(segmentationId, postedImages) = await _innerEyeSegmentationClient.StartSegmentationAsync(modelGuid, channelData).ConfigureAwait(false);
LogInformation(LogEntry.Create(AssociationStatus.Uploaded,
uploadQueueItem: uploadQueueItem,
segmentationId: segmentationId,
modelId: modelGuid));
var isDryRun = clientConfiguration.Config.AETConfigType == AETConfigType.ModelWithResultDryRun;
var resultsDirectory = GetResultsDirectory(
uploadQueueItem.RootDicomFolderPath,
isDryRun: isDryRun);
// Copy any data needed to be sent with result to results directory if needed.
if (clientConfiguration.ShouldReturnImage)
{
CopySendDataToResultsDirectory(resultsDirectory, channelData);
}
return(new DownloadQueueItem(
segmentationId: segmentationId,
modelId: modelGuid,
resultsDirectory: resultsDirectory,
referenceDicomFiles: referenceDicomByteArrays,
calledApplicationEntityTitle: uploadQueueItem.CalledApplicationEntityTitle,
callingApplicationEntityTitle: uploadQueueItem.CallingApplicationEntityTitle,
destinationApplicationEntity: new GatewayApplicationEntity(
clientConfiguration.Destination.Title,
clientConfiguration.Destination.Port,
clientConfiguration.Destination.Ip),
tagReplacementJsonString: JsonConvert.SerializeObject(tagReplacements),
associationGuid: uploadQueueItem.AssociationGuid,
associationDateTime: uploadQueueItem.AssociationDateTime,
isDryRun: isDryRun));
}
