public void Test()
{
var items = new ChromosomeCountSlimItemXmlFormat().ReadFromFile(@"../../../data/CMS-306.bam.count.mapped.xml");
var queries = items.GetQueries();
Assert.AreEqual("NB501087:31:HTGWLBGXX:1:21112:13668:5159", queries[1].Qname);
Assert.AreEqual(3, queries[1].Chromosomes.Count);
items.MergeCalculateSortByEstimatedCount();
Assert.AreEqual(1, items.Count);
Assert.AreEqual(2, items[0].Queries.Count);
Assert.AreEqual(2, items[0].Names.Count);
Assert.IsTrue(items[0].Names.Contains("gma-miR166k"));
Assert.IsTrue(items[0].Names.Contains("gma-miR166h-3p"));
Assert.AreEqual(2, queries[1].Chromosomes.Count);
Assert.AreEqual(28, items[0].EstimatedCount);
}
