/// <summary>
/// Loads the distribution of insert sizes, creates an array of [counts]
/// </summary>
void loadDistribution()
{
//load all the data
var producer = bp.ParseRangeAsEnumerableSequences(FileName, mtDNAName, 0, Int32.MaxValue);
//Go through and make an array of counts
foreach (var s in producer)
{
TotalMTReads++;
if ((s.Flag & SAMFlags.PairedRead) != SAMFlags.PairedRead)
{
continue;
}
else if (s.ISize == 0)
{
CountZero++;
}
else
{
int i = s.ISize;
//those less than 0 should have their mate contain a value, can continue
if (i < 0)
{
continue;
}
else if (i > (StaticResources.CRS_LENGTH - 1))
{
CountOverMax++;
}
else
{
countsOfSize [i] += 1.0;
}
}
}
}
