protected virtual void WriteProcessingInfoToLog()
{
Logger.Instance.AddEntry("DeconTools.Backend.dll version = " + AssemblyInfoRetriever.GetVersion(typeof(ScanBasedWorkflow)));
Logger.Instance.AddEntry("ParameterFile = " + (NewDeconToolsParameters.ParameterFilename == null ? "[NONE]" :
Path.GetFileName(NewDeconToolsParameters.ParameterFilename)));
Logger.Instance.AddEntry("UIMFLibrary version = " + AssemblyInfoRetriever.GetVersion(typeof(UIMFLibrary.DataReader)), Logger.Instance.OutputFilename); //forces it to write out immediately and clear buffer
}
public void getAssemblyVersionInfoTest1()
{
string versionString = AssemblyInfoRetriever.GetVersion(typeof(Task));
Console.WriteLine("Version = " + versionString);
Assert.Greater(versionString.Length, 10);
}
public Form1()
{
InitializeComponent();
GetSettings();
progressBar2.Maximum = 10;
this.Text = "DeconTools AutoProcessor_" + AssemblyInfoRetriever.GetVersion(typeof(Task), false);
}
public static ScanBasedWorkflow CreateWorkflow(string datasetFileName, string parameterFile, string outputFolderPath = null, BackgroundWorker backgroundWorker = null, bool useNewDeconToolsParameterObjects = true)
{
var datasetFile = new FileInfo(datasetFileName);
if (!datasetFile.Exists)
{
var datasetFolder = new DirectoryInfo(datasetFileName);
if (!datasetFolder.Exists)
{
throw new FileNotFoundException("Dataset file (or folder) not found: " + datasetFile);
}
}
var paramFile = new FileInfo(parameterFile);
if (!paramFile.Exists)
{
throw new FileNotFoundException("Parameter file not found: " + parameterFile);
}
// Initialize a new Run
Run run;
try
{
run = new RunFactory().CreateRun(datasetFileName);
}
catch (Exception ex)
{
Logger.Instance.OutputFilename = datasetFileName + "_BAD_ERROR_log.txt";
Logger.Instance.AddEntry("DeconTools.Backend.dll version = " + AssemblyInfoRetriever.GetVersion(typeof(ScanBasedWorkflow)));
Logger.Instance.AddEntry("UIMFLibrary version = " + AssemblyInfoRetriever.GetVersion(typeof(UIMFLibrary.DataReader)), Logger.Instance.OutputFilename); //forces it to write out immediately and clear buffer
Logger.Instance.AddEntry("ERROR message= " + ex.Message, Logger.Instance.OutputFilename);
Logger.Instance.AddEntry("ERROR type= " + ex, Logger.Instance.OutputFilename);
Logger.Instance.AddEntry("STACKTRACE = " + PRISM.clsStackTraceFormatter.GetExceptionStackTraceMultiLine(ex), Logger.Instance.OutputFilename);
throw new ApplicationException(
"A fatal error occured when connecting to the instrument data file. Could not create the Run object. Internal error message: " +
ex.Message + Environment.NewLine + Environment.NewLine + PRISM.clsStackTraceFormatter.GetExceptionStackTraceMultiLine(ex));
}
DeconToolsParameters newParameters;
try
{
newParameters = new DeconToolsParameters();
newParameters.LoadFromOldDeconToolsParameterFile(parameterFile);
}
catch (Exception ex)
{
throw new ApplicationException(
"Error loading the parameter file: " +
ex.Message + Environment.NewLine + Environment.NewLine + PRISM.clsStackTraceFormatter.GetExceptionStackTraceMultiLine(ex));
}
try
{
return(CreateWorkflow(run, newParameters, outputFolderPath, backgroundWorker));
}
catch (Exception ex)
{
throw new ApplicationException(
"Error creating the workflow: " +
ex.Message + Environment.NewLine + Environment.NewLine + PRISM.clsStackTraceFormatter.GetExceptionStackTraceMultiLine(ex));
}
}
protected override void WriteProcessingInfoToLog()
{
Logger.Instance.AddEntry("DeconTools.Backend.dll version = " + AssemblyInfoRetriever.GetVersion(typeof(ScanBasedWorkflow)));
Logger.Instance.AddEntry("ParameterFile = " + (NewDeconToolsParameters.ParameterFilename == null ? "[NONE]" :
Path.GetFileName(NewDeconToolsParameters.ParameterFilename)), true);
}
public static string getRapidVersion()
{
return(AssemblyInfoRetriever.GetVersion(typeof(RapidEngine.Decon2LS.HornTransform.clsHornTransform)));
}