public CalculatedPeaks AutoSizePeak(TracerFormula tracerFormula, AdjustPeaksMode adjustPeaksMode)
{
if (tracerFormula.Equals(BasePeakKey))
{
return(this);
}
var result = new CalculatedPeaks(PeptideFileAnalysis)
{
AutoFindPeak = false,
};
var oldBasePeak = _peaks[BasePeakKey];
result.MakeBasePeak(BasePeakKey, oldBasePeak.StartTime, oldBasePeak.EndTime);
foreach (var entry in _peaks)
{
if (entry.Key.Equals(BasePeakKey))
{
continue;
}
Peak?newPeak = null;
if (entry.Key.Equals(tracerFormula))
{
double width = oldBasePeak.EndTime - oldBasePeak.StartTime;
if (adjustPeaksMode == AdjustPeaksMode.Full)
{
newPeak = result.FindMatchingPeak(tracerFormula);
}
else if (adjustPeaksMode == AdjustPeaksMode.Overlapping)
{
newPeak = result.FindMatchingPeak(tracerFormula, entry.Value.StartTime - width, entry.Value.EndTime + width);
}
else if (adjustPeaksMode == AdjustPeaksMode.Narrow)
{
newPeak = result.FindMatchingPeak(tracerFormula,
Math.Min(entry.Value.StartTime, entry.Value.EndTime - width),
Math.Max(entry.Value.EndTime, entry.Value.StartTime + width));
}
}
if (newPeak == null)
{
result.MakeSecondaryPeak(entry.Key, entry.Value.StartTime, entry.Value.EndTime);
}
}
result.FinishCalculation();
return(result);
}
public CalculatedPeaks AutoSizePeak(TracerFormula tracerFormula, AdjustPeaksMode adjustPeaksMode)
{
if (tracerFormula.Equals(BasePeakKey))
{
return this;
}
var result = new CalculatedPeaks(PeptideFileAnalysis)
{
AutoFindPeak = false,
};
var oldBasePeak = _peaks[BasePeakKey];
result.MakeBasePeak(BasePeakKey, oldBasePeak.StartTime, oldBasePeak.EndTime);
foreach (var entry in _peaks)
{
if (entry.Key.Equals(BasePeakKey))
{
continue;
}
Peak? newPeak = null;
if (entry.Key.Equals(tracerFormula))
{
double width = oldBasePeak.EndTime - oldBasePeak.StartTime;
if (adjustPeaksMode == AdjustPeaksMode.Full)
{
newPeak = result.FindMatchingPeak(tracerFormula);
}
else if (adjustPeaksMode == AdjustPeaksMode.Overlapping)
{
newPeak = result.FindMatchingPeak(tracerFormula, entry.Value.StartTime - width, entry.Value.EndTime + width);
}
else if (adjustPeaksMode == AdjustPeaksMode.Narrow)
{
newPeak = result.FindMatchingPeak(tracerFormula,
Math.Min(entry.Value.StartTime, entry.Value.EndTime - width),
Math.Max(entry.Value.EndTime, entry.Value.StartTime + width));
}
}
if (newPeak == null)
{
result.MakeSecondaryPeak(entry.Key, entry.Value.StartTime, entry.Value.EndTime);
}
}
result.FinishCalculation();
return result;
}
