public ScanAnnotationSettingsForm( GraphForm graphForm )
{
InitializeComponent();
mzMatchToleranceUnitList.Add( "Da/z" );
//mzMatchToleranceUnitList.Add( "ppm" );
//mzMatchToleranceUnitList.Add( "resolving power" );
ownerGraphForm = graphForm;
matchToleranceUnitsComboBox.Items.AddRange( (object[]) mzMatchToleranceUnitList.ToArray() );
matchToleranceUnitsComboBox.SelectedIndex = (int) ownerGraphForm.ScanAnnotationSettings.MatchToleranceUnit;
matchToleranceCheckbox.Checked = ownerGraphForm.ScanAnnotationSettings.MatchToleranceOverride;
matchToleranceTextBox.Text = ownerGraphForm.ScanAnnotationSettings.MatchTolerance.ToString();
showMzLabelsCheckbox.Checked = ownerGraphForm.ScanAnnotationSettings.ShowPointMZs;
showIntensityLabelsCheckbox.Checked = ownerGraphForm.ScanAnnotationSettings.ShowPointIntensities;
if( !matchToleranceCheckbox.Checked )
{
matchToleranceTextBox.Enabled = false;
matchToleranceUnitsComboBox.Enabled = false;
}
showMatchedAnnotationsCheckbox.Checked = ownerGraphForm.ScanAnnotationSettings.ShowMatchedAnnotations;
showUnmatchedAnnotationsCheckbox.Checked = ownerGraphForm.ScanAnnotationSettings.ShowUnmatchedAnnotations;
foreach( LabelToAliasAndColorPair itr in ownerGraphForm.ScanAnnotationSettings.LabelToAliasAndColorMap )
{
aliasAndColorMappingListBox.Items.Add( new LabelToAliasAndColorListItem( itr ) );
}
}
public ChromatogramAnnotationSettingsForm( GraphForm graphForm )
{
InitializeComponent();
matchToleranceUnitList.Add( "sec." );
//matchToleranceUnitList.Add( "min." );
//matchToleranceUnitList.Add( "hours" );
ownerGraphForm = graphForm;
matchToleranceUnitsComboBox.Items.AddRange( (object[]) matchToleranceUnitList.ToArray() );
matchToleranceUnitsComboBox.SelectedIndex = (int) ownerGraphForm.ChromatogramAnnotationSettings.MatchToleranceUnit;
matchToleranceCheckbox.Checked = ownerGraphForm.ChromatogramAnnotationSettings.MatchToleranceOverride;
matchToleranceTextBox.Text = ownerGraphForm.ChromatogramAnnotationSettings.MatchTolerance.ToString();
showTimeLabelsCheckbox.Checked = ownerGraphForm.ChromatogramAnnotationSettings.ShowPointTimes;
showTotalIntensityLabelsCheckbox.Checked = ownerGraphForm.ChromatogramAnnotationSettings.ShowPointIntensities;
if( !matchToleranceCheckbox.Checked )
{
matchToleranceTextBox.Enabled = false;
matchToleranceUnitsComboBox.Enabled = false;
}
showMatchedAnnotationsCheckbox.Checked = ownerGraphForm.ChromatogramAnnotationSettings.ShowMatchedAnnotations;
showUnmatchedAnnotationsCheckbox.Checked = ownerGraphForm.ChromatogramAnnotationSettings.ShowUnmatchedAnnotations;
foreach( LabelToAliasAndColorPair itr in ownerGraphForm.ChromatogramAnnotationSettings.LabelToAliasAndColorMap )
{
aliasAndColorMappingListBox.Items.Add( new LabelToAliasAndColorListItem( itr ) );
}
}
public AnnotationEditForm( GraphForm graphForm )
{
InitializeComponent();
ownerGraphForm = graphForm;
PointDataMap<SeemsPointAnnotation> annotationMap = ownerGraphForm.CurrentPointAnnotations;
foreach( SeemsPointAnnotation annotation in annotationMap.Values )
annotationListBox.Items.Add( new AnnotationListItem( annotation ) );
}
protected void OnGraphFormGotFocus(Manager sender, GraphForm graphForm)
{
if (GraphFormGotFocus != null)
GraphFormGotFocus(sender, graphForm);
}
public GraphForm OpenGraph( bool giveFocus )
{
GraphForm graphForm = new GraphForm(this);
graphForm.ZedGraphControl.PreviewKeyDown += new PreviewKeyDownEventHandler( graphForm_PreviewKeyDown );
graphForm.ItemGotFocus += new EventHandler( form_GotFocus );
graphForm.Show( DockPanel, DockState.Document );
if( giveFocus )
graphForm.Activate();
return graphForm;
}
public GraphForm CreateGraph()
{
GraphForm graphForm = new GraphForm(this);
graphForm.ZedGraphControl.PreviewKeyDown += new PreviewKeyDownEventHandler( graphForm_PreviewKeyDown );
graphForm.ItemGotFocus += new EventHandler( form_GotFocus );
return graphForm;
}
private void showDataStacked(GraphForm hostGraph, GraphItem item )
{
Pane pane = new Pane();
pane.Add( item );
hostGraph.PaneList.Add( pane );
hostGraph.Refresh();
}
private void showDataOverlay(GraphForm hostGraph, GraphItem item )
{
hostGraph.PaneList[0].Add( item );
hostGraph.Refresh();
}
private void showData( GraphForm hostGraph, GraphItem item )
{
Pane pane;
if( hostGraph.PaneList.Count == 0 || hostGraph.PaneList.Count > 1 )
{
hostGraph.PaneList.Clear();
pane = new Pane();
hostGraph.PaneList.Add( pane );
} else
{
pane = hostGraph.PaneList[0];
pane.Clear();
}
pane.Add( item );
hostGraph.Refresh();
}
void Manager_GraphFormGotFocus (Manager sender, GraphForm graphForm)
{
if (graphForm.FocusedPane != null && graphForm.FocusedItem.Tag is MassSpectrum)
{
AnnotationButton.Enabled = true;
DataProcessingButton.Enabled = true;
}
else
{
AnnotationButton.Enabled = false;
DataProcessingButton.Enabled = false;
}
}
private void seems_MdiChildActivate( object sender, EventArgs e )
{
if( CurrentGraphForm != null )
{
/*if( CurrentGraphForm.DataSource != null )
{
dataSourceComboBox.SelectedItem = CurrentGraphForm.DataSource;
dataSourceComboBox.Refresh();
}
if( CurrentGraphForm.CurrentGraphItemIndex >= 0 )
{
scanNumberComboBox.SelectedIndex = CurrentGraphForm.CurrentGraphItemIndex;
scanNumberComboBox.UpdateTextBox();
scanNumberComboBox.Refresh();
}*/
if( CurrentGraphForm != currentGraphForm )
{
currentGraphForm = CurrentGraphForm;
/*CurrentGraphForm.LostFocus += new EventHandler( GraphForm_LostFocus );
CurrentGraphForm.ZedGraphControl.PreviewKeyDown += new PreviewKeyDownEventHandler( GraphForm_PreviewKeyDown );
CurrentGraphForm.FormClosing += new FormClosingEventHandler( GraphForm_FormClosing );
CurrentGraphForm.Resize += new EventHandler( GraphForm_Resize );
CurrentGraphForm.LocationChanged += new EventHandler( GraphForm_LocationChanged );*/
//pendingActivation = false;
}
}// else
// setScanControls( false );
/*if( ActiveMdiChild == null )
{
dataSourceComboBox.Enabled = false;
}*/
}
private void showDataOverlay( GraphForm hostGraph, ManagedDataSource managedDataSource, DataGridViewRow row )
{
showDataOverlay( hostGraph, managedDataSource, row.Tag as GraphItem );
}
private void showDataOverlay( GraphForm hostGraph, ManagedDataSource managedDataSource, GraphItem item )
{
if( item.IsChromatogram )
{
hostGraph.ShowDataOverlay( managedDataSource.Source, managedDataSource.Source.GetChromatogram( item.Index, true ) );
} else
{
SpectrumList sl = managedDataSource.SpectrumProcessingForm.ProcessingListView.ProcessingWrapper( managedDataSource.Source.MSDataFile.run.spectrumList );
hostGraph.ShowDataOverlay( managedDataSource.Source, managedDataSource.Source.GetMassSpectrum( item as MassSpectrum, sl ) );
}
}
public void UpdateGraph( GraphForm graphForm )
{
List<GraphItem> graphItems = graphForm.GraphItems;
if( graphItems.Count == 0 )
return;
showData( graphForm, dataSourceMap[graphItems[0].Source.CurrentFilepath], graphItems[0] );
for( int i = 1; i < graphItems.Count; ++i )
showDataOverlay( graphForm, dataSourceMap[graphItems[i].Source.CurrentFilepath], graphItems[i] );
}
public GraphForm CreateGraph()
{
GraphForm graphForm = new GraphForm();
graphForm.ZedGraphControl.PreviewKeyDown += new PreviewKeyDownEventHandler( graphForm_PreviewKeyDown );
return graphForm;
}
