/// <summary>
/// Class that keeps a photon's data as it moves through the tissue
/// </summary>
/// <param name="p">Position</param>
/// <param name="d">Direction</param>
/// <param name="tissue">Tissue></param>
/// <param name="currentTissueRegionIndex">integer index within ITissue definition indicating photon's current position</param>
/// <param name="generator">Random Number Generator</param>
public Photon(
Position p,
Direction d,
ITissue tissue,
int currentTissueRegionIndex,
Random generator)
{
DP = new PhotonDataPoint(
p,
d,
1.0, // weight
0.0, // total time
PhotonStateType.Alive);
//PreviousDP = null;
History = new PhotonHistory(tissue.Regions.Count);
History.AddDPToHistory(DP); // add initial datapoint
S = 0.0;
SLeft = 0.0;
CurrentRegionIndex = currentTissueRegionIndex;
// flag to determin whether passing through specular or not
// the following assumes tissues considered are slabs, only ones we have coded to date
// todo: make more general to handle other types of tissues
_firstTimeEnteringDomain = true;
if (CurrentRegionIndex >= 1) // photon does not go through specular
{
_firstTimeEnteringDomain = false;
}
CurrentTrackIndex = 0;
_tissue = tissue;
SetAbsorbAction(_tissue.AbsorptionWeightingType);
SetScatterAction(_tissue.PhaseFunctionType);
_rng = generator;
_russianRouletteWeightThreshold = _tissue.RussianRouletteWeightThreshold;
}
public static UnmanagedHistory ToUnmanagedHistory(this PhotonHistory histptr)
{
UnmanagedHistory unmanagedHistory = new UnmanagedHistory();
//UnmanagedIO.Assign1DPointer(ref histptr.xh, ref unmanagedHistory.xh);
//UnmanagedIO.Assign1DPointer(ref histptr.yh, ref unmanagedHistory.yh);
//UnmanagedIO.Assign1DPointer(ref histptr.zh, ref unmanagedHistory.zh);
//UnmanagedIO.Assign1DPointer(ref histptr.uxh, ref unmanagedHistory.uxh);
//UnmanagedIO.Assign1DPointer(ref histptr.uyh, ref unmanagedHistory.uyh);
//UnmanagedIO.Assign1DPointer(ref histptr.uzh, ref unmanagedHistory.uzh);
//UnmanagedIO.Assign1DPointer(ref histptr.weight, ref unmanagedHistory.weight);
//UnmanagedIO.Assign1DPointer(ref histptr.pert_wt, ref unmanagedHistory.pert_wt);
//UnmanagedIO.Assign1DPointer(ref histptr.path_length, ref unmanagedHistory.path_length);
//UnmanagedIO.Assign1DPointer(ref histptr.boundary_col, ref unmanagedHistory.boundary_col);
//unmanagedHistory.num_pts_stored = histptr.num_pts_stored;
//unmanagedHistory.cum_path_length = histptr.cum_path_length;
return(unmanagedHistory);
}