private static List <PatchPattern> PatchPatternCollection(VaccineAsString vaccineUncompressed)
{
List <PatchPattern> rg = new List <PatchPattern>();
PatchPatternFactory aPatchPatternFactory = PatchPatternFactory.GetFactory("strings");
foreach (string componentAsString in vaccineUncompressed.NiceStringCollection())
{
PatchPattern patchPattern = aPatchPatternFactory.GetInstance(componentAsString);
rg.Add(patchPattern);
}
return(rg);
}
static public PatchTable GetInstanceFromFile(PatchPatternFactory patchPatternFactory,
TextReader patchTableTextReader, string scorerName)
{
PatchTable patchTable = new PatchTable();
patchTable.PatchTableScorer = PatchTableScorer.GetInstance(scorerName);
foreach (Dictionary <string, string> row in SpecialFunctions.TabFileTable(patchTableTextReader, "Patch\tWeight", false))
{
PatchPattern patchPattern = patchPatternFactory.GetInstance(row["Patch"]);
double weight = double.Parse(row["Weight"]);
patchTable.SetMaxPatchLength(patchPattern);
Patch patch = Patch.GetInstance(patchPattern, weight);
patchTable.Add(patch);
}
patchTable.CreateSortedArrays();
return(patchTable);
}
static public PatchTable GetInstance(Dictionary <string, double> patchToWeight, string protein, string vaccineCriteriaName)
{
PatchTable patchTable = new PatchTable();
patchTable.PatchTableScorer = PatchTableScorer.GetInstance("normal");
PatchPatternFactory patchPatternFactory = PatchPatternFactory.GetFactory("strings");
patchTable.PatchPatternToPatch = new Dictionary <PatchPattern, Patch>();
foreach (KeyValuePair <string, double> patchAndWeight in patchToWeight)
{
string patchAsString = patchAndWeight.Key;
double weight = patchAndWeight.Value;
PatchPattern patchPattern = patchPatternFactory.GetInstance(patchAsString);
Patch aPatch = Patch.GetInstance(patchPattern, weight);
patchTable.Add(aPatch);
}
patchTable.CreateSortedArrays();
return(patchTable);
}
