public override void Initialize(string name, XmlElement xmlConfig, IDataLogger evolutionDataLogger,
IDataLogger evaluationDataLogger)
{
base.Initialize(name, xmlConfig, evolutionDataLogger, evaluationDataLogger);
// Read in the behavior characterization
_behaviorCharacterizationFactory = ExperimentUtils.ReadBehaviorCharacterizationFactory(xmlConfig,
"BehaviorConfig");
// Read in number of offspring to produce in a single batch
_batchSize = XmlUtils.GetValueAsInt(xmlConfig, "OffspringBatchSize");
// Read in the bridging magnitude and number of applications
_bridgingMagnitude = XmlUtils.TryGetValueAsInt(xmlConfig, "BridgingMagnitude") ?? default(int);
_bridgingApplications = XmlUtils.TryGetValueAsInt(xmlConfig, "BridgingApplications") ?? default(int);
// Read in the number of seed genomes to generate to bootstrap the primary algorithm
SeedGenomeCount = XmlUtils.GetValueAsInt(xmlConfig, "SeedGenomeCount");
// Read in log file path/name
_evolutionDataLogger = evolutionDataLogger ??
ExperimentUtils.ReadDataLogger(xmlConfig, LoggingType.Evolution);
_evaluationDataLogger = evaluationDataLogger ??
ExperimentUtils.ReadDataLogger(xmlConfig, LoggingType.Evaluation);
// Setup the specific logging options based on parameters that are enabled/disabled
_experimentLogFieldEnableMap = EvolutionFieldElements.PopulateEvolutionFieldElementsEnableMap();
// Enable or disable genome XML logging
if (SerializeGenomeToXml == false)
{
_experimentLogFieldEnableMap.Add(EvolutionFieldElements.ChampGenomeXml, false);
}
// Enable or disable primary fitness logging (causing utilization of auxiliary fitness)
if (_bridgingMagnitude > 0)
{
_experimentLogFieldEnableMap.Add(EvolutionFieldElements.ChampGenomeFitness, false);
}
// Initialize the initialization algorithm
_mazeNavigationInitializer = new NoveltySearchMazeNavigationInitializer(MaxEvaluations, _evolutionDataLogger,
_evaluationDataLogger,
SerializeGenomeToXml);
// Setup initialization algorithm
_mazeNavigationInitializer.SetAlgorithmParameters(
xmlConfig.GetElementsByTagName("InitializationAlgorithmConfig", "")[0] as XmlElement, InputCount,
OutputCount);
// Pass in maze experiment specific parameters
_mazeNavigationInitializer.SetEnvironmentParameters(MaxDistanceToTarget, MaxTimesteps, MazeVariant,
MinSuccessDistance);
}
public override void Initialize(ExperimentDictionary experimentDictionary)
{
base.Initialize(experimentDictionary);
// Read in the behavior characterization
_behaviorCharacterizationFactory = ExperimentUtils.ReadBehaviorCharacterizationFactory(
experimentDictionary, true);
// Read in number of offspring to produce in a single batch
_batchSize = experimentDictionary.Primary_OffspringBatchSize ?? default(int);
// Read in the bridging magnitude
_bridgingMagnitude = experimentDictionary.Primary_MCS_BridgingMagnitude ?? default(int);
_bridgingApplications = experimentDictionary.Primary_MCS_BridgingApplications ?? default(int);
// TODO: Read seed genome count from the database
// Read in log file path/name
_evolutionDataLogger = new McsExperimentEvaluationEntityDataLogger(experimentDictionary.ExperimentName);
_evaluationDataLogger =
new McsExperimentOrganismStateEntityDataLogger(experimentDictionary.ExperimentName);
// Initialize the initialization algorithm
_mazeNavigationInitializer = new NoveltySearchMazeNavigationInitializer(MaxEvaluations, _evolutionDataLogger,
_evaluationDataLogger,
SerializeGenomeToXml);
// Setup initialization algorithm
_mazeNavigationInitializer.SetAlgorithmParameters(experimentDictionary, InputCount, OutputCount);
// Pass in maze experiment specific parameters
_mazeNavigationInitializer.SetEnvironmentParameters(MaxDistanceToTarget, MaxTimesteps, MazeVariant,
MinSuccessDistance);
}