public void GetMatchTest()
{
int length = 1;
int step = 1;
string required1 = "A";
var seek = new Seeker(new StartIterator(chain, length, step));
seek.Seek(new List<string> { required1 });
Assert.True(seek.Arrangement.Count == 4);
}
public void SeekTwoTest()
{
int length = 1;
int step = 1;
string required1 = "AA";
string required2 = "C";
string required3 = "TTA";
var list = new List<string> { "AA", "AAAT", "AJJTTA" };
var seek = new Seeker(new StartIterator(new ComplexChain(list), length, step));
seek.Seek(new List<string> { required1 });
Assert.True(seek.Arrangement.Count == 1);
seek.Seek(new List<string> { required2 });
Assert.True(seek.Arrangement.Count == 0);
seek.Seek(new List<string> { required3 });
Assert.True(seek.Arrangement.Count == 0);
}
public void SeekTest()
{
int length = 1;
int step = 1;
string required1 = "A";
string required2 = "C";
string required3 = "T";
string required4 = "G";
var seek = new Seeker(new StartIterator(chain, length, step));
seek.Seek(new List<string> { required1 });
Assert.True(seek.Arrangement.Count == 4);
seek.Seek(new List<string> { required2 });
Assert.True(seek.Arrangement.Count == 5);
seek.Seek(new List<string> { required3 });
Assert.True(seek.Arrangement.Count == 6);
seek.Seek(new List<string> { required4 });
Assert.True(seek.Arrangement.Count == 3);
}