private IEnumerable <KeyValuePair <HlaMsr1, KeyValuePair <double, bool> > > ExpandHla(HlaMsr1 hlaAbstractOrGround, LinkedList1 <HlaMsr1> linkedList1)
{
//Reference: http://en.wikipedia.org/wiki/Multinomial_logit#Model
//Dictionary<string, Dictionary<HlaMsr1, double>> predictorNameToTargetHlaToWeight = Ethnicity.ClassNamePredictorNameOrInterceptToTargetToWeight[hlaAbstractOrGround.ClassName];
EClass eclass = Ethnicity.HlaClassNameToEClass[hlaAbstractOrGround.ClassName];
bool usedLowerResModel = false;
foreach (LinkedList1 <int> hlaLengthList in eclass.HlaLengthListSorted())
{
bool anyReturned = false;
TableInfo tableInfo = eclass.HlaLengthListToTableInfo[hlaLengthList];
foreach (var hlaAndProb in ExpandHla(tableInfo, hlaAbstractOrGround, linkedList1))
{
anyReturned = true;
yield return(new KeyValuePair <HlaMsr1, KeyValuePair <double, bool> >(hlaAndProb.Key, new KeyValuePair <double, bool>(hlaAndProb.Value, usedLowerResModel)));
}
if (anyReturned)
{
yield break; // really yield break, not yield return or return;
}
usedLowerResModel = true;
}
throw new HlaNotInModelException(hlaAbstractOrGround.Name, string.Format("Can't find {0} or any prefix in any model", hlaAbstractOrGround.ToString(/*withParen*/ true)));
}
static private Dictionary <string, Ethnicity> Init()
{
Dictionary <string, Ethnicity> ethnicityNameToEthnicity = new Dictionary <string, Ethnicity>();
using (TextReader textReader = Linkdis.OpenResource("datafileList.txt"))
{
foreach (var row in SpecialFunctions.ReadDelimitedFile(textReader, new { Ethnicity = "", Class = "", HlaLengthList = "", FileName = "" }, new char[] { '\t' }, true))
{
Ethnicity ethnicity = ethnicityNameToEthnicity.GetValueOrDefault(row.Ethnicity.ToLowerInvariant());
EClass eclass = ethnicity.HlaClassNameToEClass.GetValueOrDefault(row.Class);
var hlaLengthListQuery =
from hlaLengthAsString in row.HlaLengthList.Split(' ')
select int.Parse(hlaLengthAsString);
LinkedList1 <int> hlaLengthList = LinkedList1 <int> .GetInstanceFromList(hlaLengthListQuery.ToList());
TableInfo tableInfo = eclass.HlaLengthListToTableInfo.GetValueOrDefault(hlaLengthList);
tableInfo.HlaMsr1Factory = HlaMsr1Factory.GetFactory(hlaLengthList);
tableInfo.LoadTable(row.FileName, row.Class);
}
}
return(ethnicityNameToEthnicity);
}