// ReSharper disable InconsistentNaming
public void LoadDataset(DatasetDescription datasetDescription)
{
UnloadDataset();
Interop.LoadVolume(datasetDescription.VolumeDescriptions);
Interop.VisualUpdate();
Interop.VisualUpdateColorMap();
var neuralProcessEnumerator = datasetDescription.NeuralProcessDescriptions.GetEnumerator() as IEnumerator <KeyValuePair <int, NeuralProcessDescription> >;
neuralProcessEnumerator.MoveNext();
var d3d11CudaTextureEnumerator = Interop.D3D11CudaTextures.Internal.GetEnumerator() as IEnumerator <KeyValuePair <string, ShaderResourceView> >;
d3d11CudaTextureEnumerator.MoveNext();
DatasetDescription = datasetDescription;
NeuralProcessEnumerator = neuralProcessEnumerator;
D3D11CudaTextureEnumerator = d3d11CudaTextureEnumerator;
CurrentNeuralProcess = NeuralProcessEnumerator.Current.Value;
CurrentD3D11CudaTextureIndex = 0;
CurrentSegmenterToolMode = SegmenterToolMode.Adjust;
CommittedSegmentationEqualsUndoBuffer = true;
CommittedSegmentationEqualsRedoBuffer = true;
DatasetLoaded = true;
D3D11CudaTextureEnumerator.MoveNext();
CurrentD3D11CudaTextureIndex++;
D3D11CudaTextureEnumerator.MoveNext();
CurrentD3D11CudaTextureIndex++;
}
public void LoadDataset(SegmenterImageStackLoadDescription segmenterImageStackLoadDescription)
{
var volumeDescriptions = SegmenterImageStackLoader.LoadDataset(segmenterImageStackLoadDescription);
var neuralProcessDescriptions = new ObservableDictionary <int, NeuralProcessDescription>
{
{ Constants.DEFAULT_NEURAL_PROCESS.Id, Constants.DEFAULT_NEURAL_PROCESS }
};
var datasetDescription = new DatasetDescription
{
NeuralProcessDescriptions = neuralProcessDescriptions,
VolumeDescriptions = volumeDescriptions
};
LoadDataset(datasetDescription);
}
public void LoadDataset(SegmenterImageStackLoadDescription segmenterImageStackLoadDescription, BreadcrumbXmlLoadDescription breadcrumbXmlLoadDescription)
{
var volumeDescriptions = SegmenterImageStackLoader.LoadDataset(segmenterImageStackLoadDescription);
var breadcrumbXmlLoader = new BreadcrumbXmlLoader();
var neuralProcessDescriptions = breadcrumbXmlLoader.LoadDataset(breadcrumbXmlLoadDescription);
neuralProcessDescriptions.Add(Constants.DEFAULT_NEURAL_PROCESS.Id, Constants.DEFAULT_NEURAL_PROCESS);
var datasetDescription = new DatasetDescription
{
NeuralProcessDescriptions = neuralProcessDescriptions,
VolumeDescriptions = volumeDescriptions
};
LoadDataset(datasetDescription);
}
// ReSharper restore InconsistentNaming
public void LoadDataset(DatasetDescription datasetDescription)
{
Release.Assert(false);
//datasetDescription.NeuralProcessDescriptions.Get( "Trail 1" ).BreadcrumbDescriptions.Add(
// datasetDescription.NeuralProcessDescriptions.Get( "Trail 2" ).BreadcrumbDescriptions.First() );
//datasetDescription.NeuralProcessDescriptions.Get( "Trail 1" ).BreadcrumbDescriptions.Add(
// datasetDescription.NeuralProcessDescriptions.Get( "Trail 3" ).BreadcrumbDescriptions.First() );
//datasetDescription.NeuralProcessDescriptions.Get( "Trail 1" ).BreadcrumbDescriptions.Add(
// datasetDescription.NeuralProcessDescriptions.Get( "Trail 4" ).BreadcrumbDescriptions.First() );
//datasetDescription.NeuralProcessDescriptions.Get( "Trail 1" ).BreadcrumbDescriptions.Add(
// datasetDescription.NeuralProcessDescriptions.Get( "Trail 5" ).BreadcrumbDescriptions.First() );
//datasetDescription.NeuralProcessDescriptions.Get( "Trail 1" ).BreadcrumbDescriptions.Add(
// datasetDescription.NeuralProcessDescriptions.Get( "Trail 6" ).BreadcrumbDescriptions.First() );
//datasetDescription.NeuralProcessDescriptions.Get( "Trail 1" ).BreadcrumbDescriptions.Add(
// datasetDescription.NeuralProcessDescriptions.Get( "Trail 7" ).BreadcrumbDescriptions.First() );
//datasetDescription.NeuralProcessDescriptions.Get( "Trail 1" ).Branches =
// new List<Edge>
// {
// new Edge
// {
// P1 = datasetDescription.NeuralProcessDescriptions.Get( "Trail 2" ).BreadcrumbDescriptions.First().Position,
// P2 = datasetDescription.NeuralProcessDescriptions.Get( "Trail 3" ).BreadcrumbDescriptions.First().Position
// },
// new Edge
// {
// P1 = datasetDescription.NeuralProcessDescriptions.Get( "Trail 4" ).BreadcrumbDescriptions.First().Position,
// P2 = datasetDescription.NeuralProcessDescriptions.Get( "Trail 5" ).BreadcrumbDescriptions.First().Position
// },
// new Edge
// {
// P1 = datasetDescription.NeuralProcessDescriptions.Get( "Trail 6" ).BreadcrumbDescriptions.First().Position,
// P2 = datasetDescription.NeuralProcessDescriptions.Get( "Trail 7" ).BreadcrumbDescriptions.First().Position
// }
// };
//datasetDescription.NeuralProcessDescriptions.Internal =
// new ObservableDictionary< string, NeuralProcessDescription >(
// ( from neuralProcessDescription in
// datasetDescription.NeuralProcessDescriptions.Internal
// where neuralProcessDescription.Key == "Trail 1"
// select neuralProcessDescription ).ToDictionary( b => b.Key,
// b => b.Value ) );
//Interop.LoadDataset( datasetDescription );
//VolumeDescription = datasetDescription.VolumeDescriptions.Get( "SourceMap" );
//var textureDesc3D = new Texture3DDescription
// {
// Width = VolumeDescription.NumVoxelsX,
// Height = VolumeDescription.NumVoxelsY,
// Depth = VolumeDescription.NumVoxelsZ,
// MipLevels = 1,
// Usage = ResourceUsage.Default,
// BindFlags = BindFlags.ShaderResource,
// Format = VolumeDescription.DxgiFormat
// };
//var shaderResourceViewDesc = new ShaderResourceViewDescription
// {
// Format = VolumeDescription.DxgiFormat,
// Dimension = ShaderResourceViewDimension.Texture3D,
// MipLevels = -1
// };
//mSourceTexture = new Texture3D( mD3D11Device, textureDesc3D );
//VolumeDescription.DataStream.Seek( 0, SeekOrigin.Begin );
//mD3D11DeviceContext.UpdateSubresource(
// new DataBox(
// VolumeDescription.NumVoxelsX *
// VolumeDescription.NumBytesPerVoxel,
// VolumeDescription.NumVoxelsY *
// VolumeDescription.NumVoxelsX *
// VolumeDescription.NumBytesPerVoxel,
// VolumeDescription.DataStream ),
// mSourceTexture,
// 0 );
//SourceTexture = new ShaderResourceView( mD3D11Device, mSourceTexture, shaderResourceViewDesc );
//AnisotropyFactor = 10f;
//NormalizedVolumeExtent =
// new Vector3( 1f,
// (float)VolumeDescription.NumVoxelsY / VolumeDescription.NumVoxelsX,
// ( VolumeDescription.NumVoxelsZ * AnisotropyFactor ) / VolumeDescription.NumVoxelsX );
//VolumeIndexToNormalizedVolumeCoordinates =
// Matrix.Scaling( NormalizedVolumeExtent.X / VolumeDescription.NumVoxelsX,
// NormalizedVolumeExtent.Y / VolumeDescription.NumVoxelsY,
// NormalizedVolumeExtent.Z / VolumeDescription.NumVoxelsZ );
//NormalizedVolumeCoordinatesToWorldCoordinates =
// Matrix.Reflection( new Plane( Vector3.Zero, Vector3.UnitY ) ) *
// Matrix.Translation( 0f, NormalizedVolumeExtent.Y, 0f );
//NormalizedVolumeCoordinatesToTextureCoordinates =
// Matrix.Scaling( 1f / NormalizedVolumeExtent.X,
// 1f / NormalizedVolumeExtent.Y,
// 1f / NormalizedVolumeExtent.Z );
//Camera = new Camera( NormalizedVolumeExtent * 4f,
// NormalizedVolumeExtent / 2f,
// new Vector3( 0f, 1f, 0f ),
// Matrix.PerspectiveFovLH( (float)Math.PI / 4, 1f, 0.1f, 100f ) );
//NeuralProcessDescriptions = datasetDescription.NeuralProcessDescriptions;
//AugmentedDelaunyEdges = AugmentDelaunyEdges( datasetDescription.NeuralProcessDescriptions, Interop.DelaunyEdges, VolumeIndexToNormalizedVolumeCoordinates );
//ShortestPathDescriptions = ComputeShortestPaths( datasetDescription.NeuralProcessDescriptions, AugmentedDelaunyEdges, VolumeIndexToNormalizedVolumeCoordinates );
}
