/// <summary>Does the actual water uptake and send the deltas to soil module</summary>
/// <exception cref="System.Exception">Error on computing water uptake</exception>
/// <remarks>The amount of water taken up from each soil layer is set per mySpecies</remarks>
private void DoSoilWaterUptake()
{
PMF.WaterChangedType WaterTakenUp = new PMF.WaterChangedType();
WaterTakenUp.DeltaWater = new double[nLayers];
double uptakeFraction = Math.Min(1.0, swardWaterDemand / soilAvailableWater.Sum());
double speciesFraction = 0.0;
swardWaterUptake = new double[nLayers];
if (useAltWUptake == "no")
{
// calc the amount of water to be taken up
for (int layer = 0; layer <= RootFrontier; layer++)
{
swardWaterUptake[layer] += soilAvailableWater[layer] * uptakeFraction;
WaterTakenUp.DeltaWater[layer] -= swardWaterUptake[layer];
}
// partition uptake between species, as function of their demand only
foreach (PastureSpecies mySpecies in mySward)
{
mySpecies.mySoilWaterTakenUp = new double[nLayers];
speciesFraction = mySpecies.WaterDemand / swardWaterDemand;
for (int layer = 0; layer <= RootFrontier; layer++)
mySpecies.mySoilWaterTakenUp[layer] = swardWaterUptake[layer] * speciesFraction;
}
}
else
{ // Method implemented by RCichota
// Uptake is distributed over the profile according to water availability,
// this means that water status and root distribution have been taken into account
double[] adjustedWAvailable;
double[] sumWaterAvailable = new double[nLayers];
for (int layer = 0; layer < RootFrontier; layer++)
sumWaterAvailable[layer] = mySward.Sum(mySpecies => mySpecies.SoilAvailableWater[layer]);
foreach (PastureSpecies mySpecies in mySward)
{
// get adjusted water available
adjustedWAvailable = new double[nLayers];
for (int layer = 0; layer < mySpecies.RootFrontier; layer++)
adjustedWAvailable[layer] = soilAvailableWater[layer] * mySpecies.SoilAvailableWater[layer] / sumWaterAvailable[layer];
// get fraction of demand supplied by the soil
uptakeFraction = Math.Min(1.0, mySpecies.WaterDemand / adjustedWAvailable.Sum());
// get the actual amounts taken up from each layer
mySpecies.mySoilWaterTakenUp = new double[nLayers];
for (int layer = 0; layer <= mySpecies.RootFrontier; layer++)
{
mySpecies.mySoilWaterTakenUp[layer] = adjustedWAvailable[layer] * uptakeFraction;
WaterTakenUp.DeltaWater[layer] -= mySpecies.mySoilWaterTakenUp[layer];
}
}
if (Math.Abs(WaterTakenUp.DeltaWater.Sum() + swardWaterDemand) > 0.0001)
throw new Exception("Error on computing water uptake");
}
// aggregate all water taken up
foreach (PastureSpecies mySpecies in mySward)
swardWaterUptake.Zip(mySpecies.WaterUptake, (x, y) => x + y);
// send the delta water taken up
WaterChanged.Invoke(WaterTakenUp);
}
private void OnWaterChanged(WaterChangedType WaterChanged)
{
//This event is Only used by Plant2 and AgPasture.
//This event was added so that the Plant2 module could extract water via its roots from the SoilWater module.
//At the time Plant2 was not advanced enough to be able to do a "Set" on another modules variables.
//Plant2 still uses this method to extract water using its roots.
//*+ Purpose
//* Another module wants to change our water
foreach (Layer lyr in SoilObject.TopToX(WaterChanged.DeltaWater.Length))
{
lyr.sw_dep = lyr.sw_dep + WaterChanged.DeltaWater[lyr.number-1];
SoilObject.CheckLayerForErrors(lyr.number);
}
}
/// <summary>Sends the delta water to the soil module.</summary>
private void DoSoilWaterUptake()
{
if (mySoilWaterUptake.Sum() > Epsilon)
{
WaterChangedType waterTakenUp = new WaterChangedType();
waterTakenUp.DeltaWater = new double[nLayers];
for (int layer = 0; layer <= roots.BottomLayer; layer++)
waterTakenUp.DeltaWater[layer] = -mySoilWaterUptake[layer];
if (WaterChanged != null)
WaterChanged.Invoke(waterTakenUp);
}
}
/// <summary>Computes the actual water uptake and send the deltas to soil module</summary>
/// <returns>The amount of water taken up for each soil layer</returns>
/// <exception cref="System.Exception">Error on computing water uptake</exception>
private double[] DoSoilWaterUptake()
{
PMF.WaterChangedType WaterTakenUp = new PMF.WaterChangedType();
WaterTakenUp.DeltaWater = new double[nLayers];
double uptakeFraction = Math.Min(1.0, MathUtilities.Divide(myWaterDemand, mySoilAvailableWater.Sum(), 0.0));
double[] result = new double[nLayers];
if (useAltWUptake == "no")
{
for (int layer = 0; layer <= myRootFrontier; layer++)
{
result[layer] = mySoilAvailableWater[layer] * uptakeFraction;
WaterTakenUp.DeltaWater[layer] = -result[layer];
}
}
else
{ // Method implemented by RCichota
// Uptake is distributed over the profile according to water availability,
// this means that water status and root distribution have been taken into account
for (int layer = 0; layer <= myRootFrontier; layer++)
{
result[layer] = mySoilAvailableWater[layer] * uptakeFraction;
WaterTakenUp.DeltaWater[layer] = -result[layer];
}
if (Math.Abs(WaterTakenUp.DeltaWater.Sum() + myWaterDemand) > 0.0001)
throw new Exception("Error on computing water uptake");
}
// send the delta water taken up
WaterChanged.Invoke(WaterTakenUp);
return result;
}
/// <summary>Sends the delta water to the soil module.</summary>
private void DoSoilWaterUptake()
{
if (swardSoilWaterUptake.Sum() > Epsilon)
{
WaterChangedType WaterTakenUp = new WaterChangedType();
WaterTakenUp.DeltaWater = new double[nLayers];
for (int layer = 0; layer <= RootFrontier; layer++)
WaterTakenUp.DeltaWater[layer] -= swardSoilWaterUptake[layer];
if (WaterChanged != null)
WaterChanged.Invoke(WaterTakenUp);
}
}
//called at end of OnProcess() Event Handler.
/// <summary>
/// Sugar_set_other_variableses the specified i_dlt_no3gsm.
/// </summary>
/// <param name="i_dlt_no3gsm">The i_dlt_no3gsm.</param>
/// <param name="i_dlt_nh4gsm">The i_dlt_nh4gsm.</param>
/// <param name="i_dlt_sw_dep">The i_dlt_sw_dep.</param>
void sugar_set_other_variables(double[] i_dlt_no3gsm, double[] i_dlt_nh4gsm, double[] i_dlt_sw_dep)
{
//*+ Purpose
//* Set the value of a variable or array in other module/s.
//*+ Mission Statement
//* Set value of variable or array in other module/s
//*+ Notes
//* a flag is set if any of the totals is requested. The totals are
//* reset during the next process phase when this happens.
double[] l_dlt_NO3 = new double[max_layer]; //! soil NO3 change (kg/ha)
double[] l_dlt_NH4 = new double[max_layer]; //! soil NO3 change (kg/ha)
int num_layers; //! number of layers
if (uptake_source == "calc")
{
num_layers = count_of_real_vals(dlayer, max_layer);
//sv- I added this resize, from max_layer to num_layer.
// Done so the NitrogenChanges.DeltaNO3 etc. gets an array of a sensible size.
Array.Resize(ref l_dlt_NO3, num_layers);
Array.Resize(ref l_dlt_NH4, num_layers);
Array.Resize(ref i_dlt_sw_dep, num_layers);
for (int layer = 0; layer < num_layers; layer++)
{
l_dlt_NO3[layer] = i_dlt_no3gsm[layer] * gm2kg / sm2ha;
l_dlt_NH4[layer] = i_dlt_nh4gsm[layer] * gm2kg / sm2ha;
}
NitrogenChangedType NitrogenChanges = new NitrogenChangedType();
NitrogenChanges.Sender = "Sugarcane";
NitrogenChanges.DeltaNO3 = l_dlt_NO3;
NitrogenChanges.DeltaNH4 = l_dlt_NH4;
NitrogenChanged.Invoke(NitrogenChanges); //trigger/invoke the Nitrogen Changed Event
WaterChangedType WaterChanges = new WaterChangedType();
WaterChanges.DeltaWater = i_dlt_sw_dep;
WaterChanged.Invoke(WaterChanges); //trigger/invoke the Water Changed Event
}
else if (uptake_source == "swim3")
{
num_layers = count_of_real_vals(dlayer, max_layer);
//sv- I added this resize, from max_layer to num_layer
// Done so the NitrogenChanges.DeltaNO3 etc. gets an array of the sensible size.
Array.Resize(ref l_dlt_NO3, num_layers);
Array.Resize(ref l_dlt_NH4, num_layers);
for (int layer = 0; layer < num_layers; layer++)
{
l_dlt_NO3[layer] = i_dlt_no3gsm[layer] * gm2kg / sm2ha;
l_dlt_NH4[layer] = i_dlt_nh4gsm[layer] * gm2kg / sm2ha;
}
NitrogenChangedType NitrogenChanges = new NitrogenChangedType();
NitrogenChanges.Sender = "Sugarcane";
NitrogenChanges.DeltaNO3 = l_dlt_NO3;
NitrogenChanges.DeltaNH4 = l_dlt_NH4;
NitrogenChanged.Invoke(NitrogenChanges); //trigger/invoke the Nitrogen Changed Event
}
else
{
//! assume that the module that calculated uptake has also updated these pools.
}
}
//===============================================
/// <summary>
/// water uptake processes ...
/// Rainss Notes 20010707
/// - Should this be done per species? Is using the root frontier an acceptable solution?
/// - Plant2 breaks this into two parts: WaterSupply and DoWaterUptake
/// </summary>
/// <returns></returns>
private double SWUptakeProcess()
{
SoilCrop soilCrop = this.Soil.Crop(Name) as SoilCrop;
//find out soil available water
p_waterSupply = 0;
for (int layer = 0; layer < Soil.Thickness.Length; layer++)
{
SWSupply[layer] = Math.Max(0.0, soilCrop.KL[layer] * (Soil.Water[layer] - soilCrop.LL[layer] * (Soil.Thickness[layer])))
* LayerFractionForRoots(layer, p_rootFrontier);
if (layer < p_bottomRootLayer)
p_waterSupply += SWSupply[layer];
}
//uptake in proportion
PMF.WaterChangedType WaterUptake = new PMF.WaterChangedType();
WaterUptake.DeltaWater = new double[Soil.Thickness.Length];
//double[] SWUptake = new double[dlayer.Length];
double Fraction = Math.Min(1.0, p_waterDemand / p_waterSupply);
double actualUptake = 0.0;
for (int layer = 0; layer < p_bottomRootLayer; layer++)
{ //water are taken up only in top layers that root can reach.
SWUptake[layer] = SWSupply[layer] * Fraction;
actualUptake += SWUptake[layer];
WaterUptake.DeltaWater[layer] = -SWUptake[layer];
}
if (WaterChanged != null)
WaterChanged.Invoke(WaterUptake);
return actualUptake;
}