public BoundMapper(IExceptionContext ectx, TreeEnsembleFeaturizerBindableMapper owner,
RoleMappedSchema schema)
{
Contracts.AssertValue(ectx);
ectx.AssertValue(owner);
ectx.AssertValue(schema);
ectx.Assert(schema.Feature.HasValue);
_ectx = ectx;
_owner = owner;
InputRoleMappedSchema = schema;
// A vector containing the output of each tree on a given example.
var treeValueType = new VectorType(NumberType.Float, _owner._ensemble.TrainedEnsemble.NumTrees);
// An indicator vector with length = the total number of leaves in the ensemble, indicating which leaf the example
// ends up in all the trees in the ensemble.
var leafIdType = new VectorType(NumberType.Float, _owner._totalLeafCount);
// An indicator vector with length = the total number of nodes in the ensemble, indicating the nodes on
// the paths of the example in all the trees in the ensemble.
// The total number of nodes in a binary tree is equal to the number of internal nodes + the number of leaf nodes,
// and it is also equal to the number of children of internal nodes (which is 2 * the number of internal nodes)
// plus one (since the root node is not a child of any node). So we have #internal + #leaf = 2*(#internal) + 1,
// which means that #internal = #leaf - 1.
// Therefore, the number of internal nodes in the ensemble is #leaf - #trees.
var pathIdType = new VectorType(NumberType.Float, _owner._totalLeafCount - _owner._ensemble.TrainedEnsemble.NumTrees);
OutputSchema = Schema.Create(new SchemaImpl(ectx, owner, treeValueType, leafIdType, pathIdType));
}
public static IDataTransform CreateForEntryPoint(IHostEnvironment env, ArgumentsForEntryPoint args, IDataView input)
{
Contracts.CheckValue(env, nameof(env));
var host = env.Register("Tree Featurizer Transform");
host.CheckValue(args, nameof(args));
host.CheckValue(input, nameof(input));
host.CheckUserArg(args.PredictorModel != null, nameof(args.PredictorModel), "Please specify a predictor model.");
IDataTransform xf;
using (var ch = host.Start("Create Tree Ensemble Scorer"))
{
var scorerArgs = new TreeEnsembleFeaturizerBindableMapper.Arguments()
{
Suffix = args.Suffix
};
var predictor = args.PredictorModel.Predictor;
ch.Trace("Prepare data");
RoleMappedData data = null;
args.PredictorModel.PrepareData(env, input, out data, out var predictor2);
ch.AssertValue(data);
ch.Assert(predictor == predictor2);
// Make sure that the given predictor has the correct number of input features.
if (predictor is CalibratedPredictorBase)
{
predictor = ((CalibratedPredictorBase)predictor).SubPredictor;
}
// Predictor should be a FastTreePredictionWrapper, which implements IValueMapper, so this should
// be non-null.
var vm = predictor as IValueMapper;
ch.CheckUserArg(vm != null, nameof(args.PredictorModel), "Predictor does not have compatible type");
if (data != null && vm.InputType.VectorSize != data.Schema.Feature.Type.VectorSize)
{
throw ch.ExceptUserArg(nameof(args.PredictorModel),
"Predictor expects {0} features, but data has {1} features",
vm.InputType.VectorSize, data.Schema.Feature.Type.VectorSize);
}
var bindable = new TreeEnsembleFeaturizerBindableMapper(env, scorerArgs, predictor);
var bound = bindable.Bind(env, data.Schema);
xf = new GenericScorer(env, scorerArgs, data.Data, bound, data.Schema);
ch.Done();
}
return(xf);
}
public SchemaImpl(IExceptionContext ectx, TreeEnsembleFeaturizerBindableMapper parent,
ColumnType treeValueColType, ColumnType leafIdColType, ColumnType pathIdColType)
{
Contracts.CheckValueOrNull(ectx);
_ectx = ectx;
_ectx.AssertValue(parent);
_ectx.AssertValue(treeValueColType);
_ectx.AssertValue(leafIdColType);
_ectx.AssertValue(pathIdColType);
_parent = parent;
_names = new string[3];
_names[TreeIdx] = OutputColumnNames.Trees;
_names[LeafIdx] = OutputColumnNames.Leaves;
_names[PathIdx] = OutputColumnNames.Paths;
_types = new ColumnType[3];
_types[TreeIdx] = treeValueColType;
_types[LeafIdx] = leafIdColType;
_types[PathIdx] = pathIdColType;
}
public static IDataTransform Create(IHostEnvironment env, Arguments args, IDataView input)
{
Contracts.CheckValue(env, nameof(env));
var host = env.Register("Tree Featurizer Transform");
host.CheckValue(args, nameof(args));
host.CheckValue(input, nameof(input));
host.CheckUserArg(!string.IsNullOrWhiteSpace(args.TrainedModelFile) || args.Trainer != null, nameof(args.TrainedModelFile),
"Please specify either a trainer or an input model file.");
host.CheckUserArg(!string.IsNullOrEmpty(args.FeatureColumn), nameof(args.FeatureColumn), "Transform needs an input features column");
IDataTransform xf;
using (var ch = host.Start("Create Tree Ensemble Scorer"))
{
var scorerArgs = new TreeEnsembleFeaturizerBindableMapper.Arguments()
{
Suffix = args.Suffix
};
if (!string.IsNullOrWhiteSpace(args.TrainedModelFile))
{
if (args.Trainer != null)
{
ch.Warning("Both an input model and a trainer were specified. Using the model file.");
}
ch.Trace("Loading model");
IPredictor predictor;
using (Stream strm = new FileStream(args.TrainedModelFile, FileMode.Open, FileAccess.Read))
using (var rep = RepositoryReader.Open(strm, ch))
ModelLoadContext.LoadModel <IPredictor, SignatureLoadModel>(host, out predictor, rep, ModelFileUtils.DirPredictor);
ch.Trace("Creating scorer");
var data = TrainAndScoreTransform.CreateDataFromArgs(ch, input, args);
// Make sure that the given predictor has the correct number of input features.
if (predictor is CalibratedPredictorBase)
{
predictor = ((CalibratedPredictorBase)predictor).SubPredictor;
}
// Predictor should be a FastTreePredictionWrapper, which implements IValueMapper, so this should
// be non-null.
var vm = predictor as IValueMapper;
ch.CheckUserArg(vm != null, nameof(args.TrainedModelFile), "Predictor in model file does not have compatible type");
if (vm.InputType.VectorSize != data.Schema.Feature.Type.VectorSize)
{
throw ch.ExceptUserArg(nameof(args.TrainedModelFile),
"Predictor in model file expects {0} features, but data has {1} features",
vm.InputType.VectorSize, data.Schema.Feature.Type.VectorSize);
}
var bindable = new TreeEnsembleFeaturizerBindableMapper(env, scorerArgs, predictor);
var bound = bindable.Bind(env, data.Schema);
xf = new GenericScorer(env, scorerArgs, input, bound, data.Schema);
}
else
{
ch.AssertValue(args.Trainer);
ch.Trace("Creating TrainAndScoreTransform");
var trainScoreArgs = new TrainAndScoreTransform.Arguments();
args.CopyTo(trainScoreArgs);
trainScoreArgs.Trainer = args.Trainer;
trainScoreArgs.Scorer = ComponentFactoryUtils.CreateFromFunction <IDataView, ISchemaBoundMapper, RoleMappedSchema, IDataScorerTransform>(
(e, data, mapper, trainSchema) => Create(e, scorerArgs, data, mapper, trainSchema));
var mapperFactory = ComponentFactoryUtils.CreateFromFunction <IPredictor, ISchemaBindableMapper>(
(e, predictor) => new TreeEnsembleFeaturizerBindableMapper(e, scorerArgs, predictor));
var labelInput = AppendLabelTransform(host, ch, input, trainScoreArgs.LabelColumn, args.LabelPermutationSeed);
var scoreXf = TrainAndScoreTransform.Create(host, trainScoreArgs, labelInput, mapperFactory);
if (input == labelInput)
{
return(scoreXf);
}
return((IDataTransform)ApplyTransformUtils.ApplyAllTransformsToData(host, scoreXf, input, labelInput));
}
}
return(xf);
}