private void RunScript(ProfinderLogic qualAppLogic, List <string> analysisFiles)
{
List <Analysis> Analyses = new List <Analysis>();
foreach (string analysisPath in analysisFiles)
{
Analysis anlysis = qualAppLogic.DataHeirarchy.AnalysisStore.Values.Cast <Analysis>().First(a => a.FilePath == analysisPath);
Analyses.Add(anlysis);
}
CmdFindByMFE cmdMFE1 = new CmdFindByMFE(qualAppLogic, MFEMode.RECURSIVE_STAGE_1, Analyses);
ExecuteCommand(qualAppLogic, cmdMFE1);
Console.WriteLine(" Find by MFE of " + MFEMode.RECURSIVE_STAGE_1 + " has completed");
CmdRecursiveMFE rmfe = new CmdRecursiveMFE(qualAppLogic, Analyses);
ExecuteCommand(qualAppLogic, rmfe);
Console.WriteLine(" recursive mfe is done ");
CmdFilterCompoundGroupsMFE cgMfe = new CmdFilterCompoundGroupsMFE(qualAppLogic, analysisFiles);
ExecuteCommand(qualAppLogic, cgMfe);
CmdFindByMFE cmdMFE2 = new CmdFindByMFE(qualAppLogic, MFEMode.RECURSIVE_STAGE_2, Analyses);
ExecuteCommand(qualAppLogic, cmdMFE2);
Console.WriteLine(" Find by MFE of " + MFEMode.RECURSIVE_STAGE_2 + " has completed");
CmdFilterCompoundGroupsMFEPost cgpMfePost = new CmdFilterCompoundGroupsMFEPost(qualAppLogic, analysisFiles);
ExecuteCommand(qualAppLogic, cgpMfePost);
Console.WriteLine(" Filtering Done ");
Console.WriteLine(" Compound Groups of datastore updated");
}
private void ExecuteScript(List <Analysis> analyses, List <string> m_analysisFiles)
{
CmdFindByMFE cmdMFE1 = new CmdFindByMFE(qualAppLogic, MFEMode.RECURSIVE_STAGE_1, analyses);
ExecuteCommand(qualAppLogic, cmdMFE1);
CmdRecursiveMFE rmfe = new CmdRecursiveMFE(qualAppLogic, analyses);
ExecuteCommand(qualAppLogic, rmfe);
CmdFilterCompoundGroupsMFE cgMfe = new CmdFilterCompoundGroupsMFE(qualAppLogic);
ExecuteCommand(qualAppLogic, cgMfe);
CmdFindByMFE cmdMFE2 = new CmdFindByMFE(qualAppLogic, MFEMode.RECURSIVE_STAGE_2, analyses);
ExecuteCommand(qualAppLogic, cmdMFE2);
CmdFilterCompoundGroupsMFEPost cgpMfePost = new CmdFilterCompoundGroupsMFEPost(qualAppLogic);
ExecuteCommand(qualAppLogic, cgpMfePost);
Console.WriteLine("Algorithm Execution Completed");
}
