//---------------------------------------------------------------------
/// <summary>
/// Initializes the instance and its associated site variables.
/// </summary>
protected void Initialize(PlugIns.ICore modelCore,
double[,] establishProbabilities,
SeedingAlgorithms seedAlg,
Reproduction.Delegates.AddNewCohort addNewCohort)
{
Model.Core = modelCore;
SiteVars.Initialize();
Seeding.InitializeMaxSeedNeighborhood();
disturbedSites = new DisturbedSiteEnumerator(Model.Core.Landscape,
SiteVars.Disturbed);
SeedingAlgorithm algorithm;
switch (seedAlg)
{
case SeedingAlgorithms.NoDispersal:
algorithm = NoDispersal.Algorithm;
break;
case SeedingAlgorithms.UniversalDispersal:
algorithm = UniversalDispersal.Algorithm;
break;
case SeedingAlgorithms.WardSeedDispersal:
algorithm = WardSeedDispersal.Algorithm;
break;
default:
throw new ArgumentException(string.Format("Unknown seeding algorithm: {0}", seedAlg));
}
Reproduction.Initialize(establishProbabilities, algorithm,
addNewCohort == null ? null : new Reproduction.Delegates.AddNewCohort(addNewCohort));
}
//---------------------------------------------------------------------
/// <summary>
/// Initializes the instance and its associated site variables.
/// </summary>
protected void Initialize(int timestep,
double[,] establishProbabilities,
int startTime,
SeedingAlgorithms seedAlg,
Reproduction.AddNewCohortMethod addNewCohort)
{
this.timestep = timestep;
this.nextTimeToRun = startTime - 1 + timestep;
this.updateNextTimeToRun = false;
SiteVars.Initialize();
SeedingAlgorithm algorithm;
switch (seedAlg)
{
case SeedingAlgorithms.NoDispersal:
algorithm = NoDispersal.Algorithm;
break;
case SeedingAlgorithms.UniversalDispersal:
algorithm = UniversalDispersal.Algorithm;
break;
case SeedingAlgorithms.WardSeedDispersal:
algorithm = WardSeedDispersal.Algorithm;
break;
default:
throw new ArgumentException(string.Format("Unknown seeding algorithm: {0}", seedAlg));
}
Reproduction.Initialize(establishProbabilities, algorithm, addNewCohort);
}
//---------------------------------------------------------------------
/// <summary>
/// Initializes the instance and its associated site variables.
/// </summary>
protected void Initialize(int timestep,
double[,] establishProbabilities)
{
this.timestep = timestep;
this.nextTimeToRun = timestep;
SiteVars.Initialize();
SiteVars.Reproduction.ActiveSiteValues = new ReproductionBySeeding(new UniversalSeeding());
Reproduction.SetEstablishProbabilities(establishProbabilities);
}
//---------------------------------------------------------------------
/// <summary>
/// Initializes the instance and its associated site variables.
/// </summary>
protected void Initialize(int timestep,
double[,] establishProbabilities)
{
this.timestep = timestep;
this.nextTimeToRun = timestep;
SiteVars.Initialize();
defaultReproduction = new Seeding(WardSeedDispersal.Algorithm);
SiteVars.Reproduction.ActiveSiteValues = defaultReproduction;
Reproduction.SetEstablishProbabilities(establishProbabilities);
}