public static List <Protocol> GetProtocolsFromFolder(string folderPath)
{
var protocols = new List <Protocol>();
var filePaths = Directory.GetFiles(folderPath, "*.csv");
foreach (string filePath in filePaths)
{
var objectives = DvhObjective.ReadObjectivesFromCsv(filePath);
var id = (objectives.First()).ProtocolId;
var protocol = new Protocol(id, filePath, objectives);
protocols.Add(protocol);
}
return(protocols);
}
public static List <DvhObjective> ReadObjectivesFromCsv(string filePath)
{
List <DvhObjective> objectives = new List <DvhObjective>();
using (StreamReader sr = new StreamReader(filePath, Encoding.GetEncoding("shift_jis")))
{
var csv = new CsvReader(sr);
csv.Read();
csv.ReadHeader();
csv.Read();
csv.Configuration.MissingFieldFound = null;
var protocolId = csv["Protocol ID"];
var originalProtocolId = csv["Original Protocol ID"];
if (string.IsNullOrEmpty(protocolId))
{
throw new InvalidOperationException("Protocol ID is empty, file: " + filePath);
}
if (string.IsNullOrEmpty(originalProtocolId))
{
originalProtocolId = protocolId;
}
csv.Read();
csv.ReadHeader();
while (csv.Read())
{
string title = csv["Title"];
string structureName = csv["Structure Name"];
string objectiveType = csv["Objective Type"];
string targetType = csv["Target Type"];
string targetValue = csv["Target Value"];
string targetUnit = csv["Target Unit"];
string acceptableLimitValue = csv["Acceptable Limit Value"];
string argumentValue = csv["Argument Value"];
string argumentUnit = csv["Argument Unit"];
string remarks = csv["Remarks"];
string structureNameTps = csv["Structure Name TPS"];
var objectiveCsv = new ObjectiveCsv()
{
ProtocolId = protocolId,
OriginalProtocolId = originalProtocolId,
Title = title,
StructureName = structureName,
ObjectiveType = objectiveType,
TargetType = targetType,
TargetValue = targetValue,
TargetUnit = targetUnit,
AcceptableLimitValue = acceptableLimitValue,
ArgumentValue = argumentValue,
ArgumentUnit = argumentUnit,
Remarks = remarks,
StructureNameTps = structureNameTps
};
var objective = new DvhObjective(objectiveCsv);
objectives.Add(objective);
}
}
return(objectives);
}
public Protocol(string id, string filePath)
{
Id = id;
FilePath = filePath;
Objectives = DvhObjective.ReadObjectivesFromCsv(filePath);
}