public static DocumentReference DocumentToDocumentReference(Composition composition, Bundle bundle, Binary bin, Uri binLocation)
{
var reference = new DocumentReference();
reference.MasterIdentifier = new Identifier(Identifier.SYSTMEM_URI, bundle.Id.ToString());
reference.Identifier = composition.Identifier != null ? new List<Identifier>() { composition.Identifier } : null;
reference.Subject = composition.Subject;
reference.Type = composition.Type;
reference.Class = composition.Class;
reference.Author = new List<ResourceReference>( composition.Author );
reference.Custodian = composition.Custodian;
reference.Authenticator = composition.Attester != null ? composition.Attester.Where(att => att.Mode.Any(am => am == Composition.CompositionAttestationMode.Professional ||
am == Composition.CompositionAttestationMode.Legal) && att.Party != null).Select(att => att.Party).Last() : null;
reference.CreatedElement = composition.Date != null ? new FhirDateTime(composition.Date) : null;
reference.IndexedElement = Instant.Now();
reference.Status = DocumentReference.DocumentReferenceStatus.Current;
reference.DocStatus = composition.Status != null ?
new CodeableConcept { Coding = new List<Coding>() { new Coding("http://hl7.org/fhir/composition-status", composition.Status.ToString()) } } : null;
// todo: Use proper Enumerator conversion for composition.Status
reference.Description = composition.Title;
reference.Confidentiality = composition.Confidentiality != null ? new List<CodeableConcept>() { new CodeableConcept() { Coding = new List<Coding>() { composition.Confidentiality } } } : null;
reference.PrimaryLanguage = composition.Language;
reference.MimeType = bin.ContentType;
reference.Format = new List<Uri>( bundle.Tags.FilterOnFhirSchemes().Where(t => t.Scheme != Tag.FHIRTAGSCHEME_SECURITY).Select(tg => new Uri(tg.Term)) );
reference.Size = bin.Content.Length;
reference.Hash = calculateSHA1(bin.Content);
reference.Location = binLocation;
if (composition.Event != null)
{
reference.Context = new DocumentReference.DocumentReferenceContextComponent();
reference.Context.Event = composition.Event.Code != null ? new List<CodeableConcept>(composition.Event.Code) : null;
reference.Context.Period = composition.Event.Period != null ? composition.Event.Period : null;
}
return reference;
}
public static void SerializeDocumentReference(Hl7.Fhir.Model.DocumentReference value, IFhirWriter writer, bool summary)
{
writer.WriteStartRootObject("DocumentReference");
writer.WriteStartComplexContent();
// Serialize element _id
if (value.LocalIdElement != null)
{
writer.WritePrimitiveContents("_id", value.LocalIdElement, XmlSerializationHint.Attribute);
}
// Serialize element extension
if (value.Extension != null && !summary && value.Extension.Count > 0)
{
writer.WriteStartArrayElement("extension");
foreach (var item in value.Extension)
{
writer.WriteStartArrayMember("extension");
ExtensionSerializer.SerializeExtension(item, writer, summary);
writer.WriteEndArrayMember();
}
writer.WriteEndArrayElement();
}
// Serialize element language
if (value.LanguageElement != null && !summary)
{
writer.WriteStartElement("language");
CodeSerializer.SerializeCode(value.LanguageElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element text
if (value.Text != null && !summary)
{
writer.WriteStartElement("text");
NarrativeSerializer.SerializeNarrative(value.Text, writer, summary);
writer.WriteEndElement();
}
// Serialize element contained
if (value.Contained != null && !summary && value.Contained.Count > 0)
{
writer.WriteStartArrayElement("contained");
foreach (var item in value.Contained)
{
writer.WriteStartArrayMember("contained");
FhirSerializer.SerializeResource(item, writer, summary);
writer.WriteEndArrayMember();
}
writer.WriteEndArrayElement();
}
// Serialize element masterIdentifier
if (value.MasterIdentifier != null && !summary)
{
writer.WriteStartElement("masterIdentifier");
IdentifierSerializer.SerializeIdentifier(value.MasterIdentifier, writer, summary);
writer.WriteEndElement();
}
// Serialize element identifier
if (value.Identifier != null && !summary && value.Identifier.Count > 0)
{
writer.WriteStartArrayElement("identifier");
foreach (var item in value.Identifier)
{
writer.WriteStartArrayMember("identifier");
IdentifierSerializer.SerializeIdentifier(item, writer, summary);
writer.WriteEndArrayMember();
}
writer.WriteEndArrayElement();
}
// Serialize element subject
if (value.Subject != null && !summary)
{
writer.WriteStartElement("subject");
ResourceReferenceSerializer.SerializeResourceReference(value.Subject, writer, summary);
writer.WriteEndElement();
}
// Serialize element type
if (value.Type != null && !summary)
{
writer.WriteStartElement("type");
CodeableConceptSerializer.SerializeCodeableConcept(value.Type, writer, summary);
writer.WriteEndElement();
}
// Serialize element subtype
if (value.Subtype != null && !summary)
{
writer.WriteStartElement("subtype");
CodeableConceptSerializer.SerializeCodeableConcept(value.Subtype, writer, summary);
writer.WriteEndElement();
}
// Serialize element author
if (value.Author != null && !summary && value.Author.Count > 0)
{
writer.WriteStartArrayElement("author");
foreach (var item in value.Author)
{
writer.WriteStartArrayMember("author");
ResourceReferenceSerializer.SerializeResourceReference(item, writer, summary);
writer.WriteEndArrayMember();
}
writer.WriteEndArrayElement();
}
// Serialize element custodian
if (value.Custodian != null && !summary)
{
writer.WriteStartElement("custodian");
ResourceReferenceSerializer.SerializeResourceReference(value.Custodian, writer, summary);
writer.WriteEndElement();
}
// Serialize element authenticator
if (value.Authenticator != null && !summary)
{
writer.WriteStartElement("authenticator");
ResourceReferenceSerializer.SerializeResourceReference(value.Authenticator, writer, summary);
writer.WriteEndElement();
}
// Serialize element created
if (value.CreatedElement != null && !summary)
{
writer.WriteStartElement("created");
FhirDateTimeSerializer.SerializeFhirDateTime(value.CreatedElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element indexed
if (value.IndexedElement != null && !summary)
{
writer.WriteStartElement("indexed");
InstantSerializer.SerializeInstant(value.IndexedElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element status
if (value.StatusElement != null && !summary)
{
writer.WriteStartElement("status");
CodeSerializer.SerializeCode <Hl7.Fhir.Model.DocumentReference.DocumentReferenceStatus>(value.StatusElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element docStatus
if (value.DocStatus != null && !summary)
{
writer.WriteStartElement("docStatus");
CodeableConceptSerializer.SerializeCodeableConcept(value.DocStatus, writer, summary);
writer.WriteEndElement();
}
// Serialize element supercedes
if (value.Supercedes != null && !summary)
{
writer.WriteStartElement("supercedes");
ResourceReferenceSerializer.SerializeResourceReference(value.Supercedes, writer, summary);
writer.WriteEndElement();
}
// Serialize element description
if (value.DescriptionElement != null && !summary)
{
writer.WriteStartElement("description");
FhirStringSerializer.SerializeFhirString(value.DescriptionElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element confidentiality
if (value.Confidentiality != null && !summary)
{
writer.WriteStartElement("confidentiality");
CodeableConceptSerializer.SerializeCodeableConcept(value.Confidentiality, writer, summary);
writer.WriteEndElement();
}
// Serialize element primaryLanguage
if (value.PrimaryLanguageElement != null && !summary)
{
writer.WriteStartElement("primaryLanguage");
CodeSerializer.SerializeCode(value.PrimaryLanguageElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element mimeType
if (value.MimeTypeElement != null && !summary)
{
writer.WriteStartElement("mimeType");
CodeSerializer.SerializeCode(value.MimeTypeElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element format
if (value.Format != null && !summary)
{
writer.WriteStartElement("format");
CodeableConceptSerializer.SerializeCodeableConcept(value.Format, writer, summary);
writer.WriteEndElement();
}
// Serialize element size
if (value.SizeElement != null && !summary)
{
writer.WriteStartElement("size");
IntegerSerializer.SerializeInteger(value.SizeElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element hash
if (value.HashElement != null && !summary)
{
writer.WriteStartElement("hash");
FhirStringSerializer.SerializeFhirString(value.HashElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element location
if (value.LocationElement != null && !summary)
{
writer.WriteStartElement("location");
FhirUriSerializer.SerializeFhirUri(value.LocationElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element service
if (value.Service != null && !summary)
{
writer.WriteStartElement("service");
DocumentReferenceSerializer.SerializeDocumentReferenceServiceComponent(value.Service, writer, summary);
writer.WriteEndElement();
}
// Serialize element context
if (value.Context != null && !summary)
{
writer.WriteStartElement("context");
DocumentReferenceSerializer.SerializeDocumentReferenceContextComponent(value.Context, writer, summary);
writer.WriteEndElement();
}
writer.WriteEndComplexContent();
writer.WriteEndRootObject();
}
/// <summary>
/// Parse DocumentReference
/// </summary>
public static Hl7.Fhir.Model.DocumentReference ParseDocumentReference(IFhirReader reader, ErrorList errors, Hl7.Fhir.Model.DocumentReference existingInstance = null)
{
Hl7.Fhir.Model.DocumentReference result = existingInstance != null ? existingInstance : new Hl7.Fhir.Model.DocumentReference();
string currentElementName = reader.CurrentElementName;
reader.EnterElement();
while (reader.HasMoreElements())
{
var atName = reader.CurrentElementName;
// Parse element extension
if (atName == "extension")
{
result.Extension = new List <Hl7.Fhir.Model.Extension>();
reader.EnterArray();
while (ParserUtils.IsAtArrayElement(reader, "extension"))
{
result.Extension.Add(ExtensionParser.ParseExtension(reader, errors));
}
reader.LeaveArray();
}
// Parse element language
else if (atName == "language")
{
result.LanguageElement = CodeParser.ParseCode(reader, errors);
}
// Parse element text
else if (atName == "text")
{
result.Text = NarrativeParser.ParseNarrative(reader, errors);
}
// Parse element contained
else if (atName == "contained")
{
result.Contained = new List <Hl7.Fhir.Model.Resource>();
reader.EnterArray();
while (ParserUtils.IsAtArrayElement(reader, "contained"))
{
result.Contained.Add(ParserUtils.ParseContainedResource(reader, errors));
}
reader.LeaveArray();
}
// Parse element _id
else if (atName == "_id")
{
result.LocalIdElement = Id.Parse(reader.ReadPrimitiveContents(typeof(Id)));
}
// Parse element masterIdentifier
else if (atName == "masterIdentifier")
{
result.MasterIdentifier = IdentifierParser.ParseIdentifier(reader, errors);
}
// Parse element identifier
else if (atName == "identifier")
{
result.Identifier = new List <Hl7.Fhir.Model.Identifier>();
reader.EnterArray();
while (ParserUtils.IsAtArrayElement(reader, "identifier"))
{
result.Identifier.Add(IdentifierParser.ParseIdentifier(reader, errors));
}
reader.LeaveArray();
}
// Parse element subject
else if (atName == "subject")
{
result.Subject = ResourceReferenceParser.ParseResourceReference(reader, errors);
}
// Parse element type
else if (atName == "type")
{
result.Type = CodeableConceptParser.ParseCodeableConcept(reader, errors);
}
// Parse element subtype
else if (atName == "subtype")
{
result.Subtype = CodeableConceptParser.ParseCodeableConcept(reader, errors);
}
// Parse element author
else if (atName == "author")
{
result.Author = new List <Hl7.Fhir.Model.ResourceReference>();
reader.EnterArray();
while (ParserUtils.IsAtArrayElement(reader, "author"))
{
result.Author.Add(ResourceReferenceParser.ParseResourceReference(reader, errors));
}
reader.LeaveArray();
}
// Parse element custodian
else if (atName == "custodian")
{
result.Custodian = ResourceReferenceParser.ParseResourceReference(reader, errors);
}
// Parse element authenticator
else if (atName == "authenticator")
{
result.Authenticator = ResourceReferenceParser.ParseResourceReference(reader, errors);
}
// Parse element created
else if (atName == "created")
{
result.CreatedElement = FhirDateTimeParser.ParseFhirDateTime(reader, errors);
}
// Parse element indexed
else if (atName == "indexed")
{
result.IndexedElement = InstantParser.ParseInstant(reader, errors);
}
// Parse element status
else if (atName == "status")
{
result.StatusElement = CodeParser.ParseCode <Hl7.Fhir.Model.DocumentReference.DocumentReferenceStatus>(reader, errors);
}
// Parse element docStatus
else if (atName == "docStatus")
{
result.DocStatus = CodeableConceptParser.ParseCodeableConcept(reader, errors);
}
// Parse element supercedes
else if (atName == "supercedes")
{
result.Supercedes = ResourceReferenceParser.ParseResourceReference(reader, errors);
}
// Parse element description
else if (atName == "description")
{
result.DescriptionElement = FhirStringParser.ParseFhirString(reader, errors);
}
// Parse element confidentiality
else if (atName == "confidentiality")
{
result.Confidentiality = CodeableConceptParser.ParseCodeableConcept(reader, errors);
}
// Parse element primaryLanguage
else if (atName == "primaryLanguage")
{
result.PrimaryLanguageElement = CodeParser.ParseCode(reader, errors);
}
// Parse element mimeType
else if (atName == "mimeType")
{
result.MimeTypeElement = CodeParser.ParseCode(reader, errors);
}
// Parse element format
else if (atName == "format")
{
result.Format = CodeableConceptParser.ParseCodeableConcept(reader, errors);
}
// Parse element size
else if (atName == "size")
{
result.SizeElement = IntegerParser.ParseInteger(reader, errors);
}
// Parse element hash
else if (atName == "hash")
{
result.HashElement = FhirStringParser.ParseFhirString(reader, errors);
}
// Parse element location
else if (atName == "location")
{
result.LocationElement = FhirUriParser.ParseFhirUri(reader, errors);
}
// Parse element service
else if (atName == "service")
{
result.Service = DocumentReferenceParser.ParseDocumentReferenceServiceComponent(reader, errors);
}
// Parse element context
else if (atName == "context")
{
result.Context = DocumentReferenceParser.ParseDocumentReferenceContextComponent(reader, errors);
}
else
{
errors.Add(String.Format("Encountered unknown element {0} while parsing {1}", reader.CurrentElementName, currentElementName), reader);
reader.SkipSubElementsFor(currentElementName);
result = null;
}
}
reader.LeaveElement();
return(result);
}
