public Environment(SimulationParameters simulationParams)
{
instance = this;
firstCorner = simulationParams.environmentFirstCorner;
secondCorner = simulationParams.environmentSecondCorner;
BlastCellTotal = 0;
FinalCellTotal = 0;
MutatedCellTotal = 0;
tissues = new List<Tissue>();
foreach (SimulationParameters.TissueParameters tissueParam in simulationParams.tissueParams)
{
tissues.Add(new Tissue(tissueParam));
}
cells = new List<TissueCell>();
newCells = new List<TissueCell>();
dyingCells = new List<TissueCell>();
signals = new List<Signal>();
newSignals = new List<Signal>();
expiredSignals = new List<Signal>();
pressurePoints = new List<LocationContents>();
Console.WriteLine("setting up environment matrix");
environmentMatrix = new LocationContents[(int)secondCorner.X + 1, (int)secondCorner.Y + 1, (int)secondCorner.Z + 1];
createMatrix(firstCorner, secondCorner);
Console.WriteLine("setting up initial pressure around the [" + tissues.Count + "] tissue(s)");
foreach(Tissue t in tissues)
setupPressureAroundTissue(t, simulationParams.SectorPressureDistance, simulationParams.SectorPressureInitial, simulationParams.SectorPressureIncrement);
Console.WriteLine("setting up sectors");
sectorMap = new Sector[(int)secondCorner.X + 1, (int)secondCorner.Y + 1, (int)secondCorner.Z + 1];
List<Sector> sectors = sectorSetup(simulationParams.SectorHeight, simulationParams.SectorWidth, simulationParams.SectorDepth);
Console.WriteLine("there are [" + sectors.Count + "] total sectors");
Console.WriteLine("creating location->sector map");
CreateSectorMap(sectors);
Console.WriteLine("initializing circulatory system");
circulatorySystem = new CirculatorySystem(simulationParams.PipeParams, simulationParams.PipeCorners);
Console.WriteLine("setting up initial pressue around the pipes");
setupPressureAroundPipes(circulatorySystem, simulationParams.PipePressureDistance, simulationParams.PipePressureInitial, simulationParams.PipePressureIncrement);
Console.WriteLine("initializing cells");
Console.WriteLine("behavior: " + simulationParams.behaviorType);
BlastCell.InitializeDivideProbabilities(simulationParams.cellParameters.BlastCellDivideIntoBlastProbability, simulationParams.cellParameters.BlastCellDivideIntoFinalProbability);
initializeCells(simulationParams.startingCells, simulationParams.behaviorType);
}
public CirculatorySystem(SimulationParameters.PipeParameters pipeParams, SimulationParameters.PipeLocations pipeCorners)
{
instance = this;
this.pipeShrinkRate = pipeParams.PipeShrink;
pipeCells = new List<EndothelialCell>();
hungryCells = new List<TissueCell>();
growingPipes = new List<GrowingPipe>();
maxNumGrowthsPerTurn = pipeParams.MaxGrowthPerTurn;
EndothelialCell root = new EndothelialCell(pipeCorners.location, pipeParams.PipeRootOrientation, pipeParams.PipeStartingWidth, null);
setupPipes(root, pipeCorners.children);
}
private void setupPressureAroundPipes(CirculatorySystem pipeSystem, int distance, int initialPressure, int pressureIncrement)
{
HashSet<Vector3> past = new HashSet<Vector3>();
HashSet<Vector3> present = new HashSet<Vector3>();
foreach(EndothelialCell pipePiece in pipeSystem.PipeCells)
present.Add(pipePiece.CellLocation);
sendPressureWave(past, present, distance, initialPressure, pressureIncrement);
}
