public MapParser()
{
_utils = new GlycoFragworkDLL.Utils.Utilities();
_ScoringParameters = new GlypID.Scoring.clsScoringParameters();
_CIDSpectralUtilities = new SpectralUtilities();
_HCDSpectralUtilities = new SpectralUtilities();
_ETDSpectralUtilities = new SpectralUtilities();
_params = new Params();
}
public MapParserOld()
{
_GlycoMap = new GlycoFragworkDLL.Classes.MapRecord();
_utils = new GlycoFragworkDLL.Utils.Utilities();
_ScoringParameters = new GlypID.Scoring.clsScoringParameters();
_TransformParameters = new GlypID.HornTransform.clsHornTransformParameters();
_binSize = 0.05;
_PPMDiff = 20;
}
public MapCreator()
{
_GlycoMap = new Classes.MapRecord() ;
_utils = new Utilities();
_glycopeptides = new List<GlycopeptideRecord> ();
_TransformParameters = new GlypID.HornTransform.clsHornTransformParameters() ;
_ParentPeakProcessorParams = new GlypID.Peaks.clsPeakProcessorParameters() ;
_MSMSPeakProcessorParams = new GlypID.Peaks.clsPeakProcessorParameters() ;
_ScoringParameters = new GlypID.Scoring.clsScoringParameters();
_HornTransform = new GlypID.HornTransform.clsHornTransform() ;
_ParentPeakProcessor = new GlypID.Peaks.clsPeakProcessor() ;
_MSMSPeakProcessor = new GlypID.Peaks.clsPeakProcessor() ;
_ParentPeaks = new GlypID.Peaks.clsPeak[1] ;
_MSMSPeaks = new GlypID.Peaks.clsPeak[1];
_ParentTransformResults = new GlypID.HornTransform.clsHornTransformResults[1];
_dGlycopeptides = new Dictionary<int, List<GlycopeptideRecord>>();
_CIDScoring = new GlypID.CIDScoring.clsCIDScoring();
_HCDScoring = new GlypID.HCDScoring.clsHCDScoring();
_ETDScoring = new GlypID.ETDScoring.clsETDScoring();
}