private void CreatePeaksForChromSourceData()
{
var parameters = new PeakDetectAndExportWorkflowParameters();
var deconParam = (TargetedWorkflowParameters)this._workflowParameters;
parameters.PeakBR = deconParam.ChromGenSourceDataPeakBR;
parameters.PeakFitType = DeconTools.Backend.Globals.PeakFitType.QUADRATIC;
parameters.SigNoiseThreshold = deconParam.ChromGenSourceDataSigNoise;
parameters.ProcessMSMS = deconParam.ProcessMsMs;
var peakCreator = new PeakDetectAndExportWorkflow(this.Run, parameters, _backgroundWorker);
peakCreator.Execute();
}
private string CreatePeaksForChromSourceData()
{
var parameters = new PeakDetectAndExportWorkflowParameters();
parameters.PeakBR = Parameters.ChromGenSourceDataPeakBR;
parameters.PeakFitType = DeconTools.Backend.Globals.PeakFitType.QUADRATIC;
parameters.SigNoiseThreshold = Parameters.ChromGenSourceDataSigNoise;
parameters.ProcessMSMS = Parameters.ChromGenSourceDataProcessMsMs;
parameters.IsDataThresholded = Parameters.ChromGenSourceDataIsThresholded;
parameters.LCScanMin = this.Run.GetMinPossibleLCScanNum();
parameters.LCScanMax = this.Run.GetMaxPossibleLCScanNum();
var peakCreator = new PeakDetectAndExportWorkflow(this.Run, parameters, _backgroundWorker);
peakCreator.Execute();
var peaksFilename = Path.Combine(this.Run.DataSetPath, this.Run.DatasetName + "_peaks.txt");
return(peaksFilename);
}
public PeakDetectAndExportWorkflow(Run run, PeakDetectAndExportWorkflowParameters parameters, BackgroundWorker bw)
: this(run, parameters)
{
this.backgroundWorker = bw;
}
public PeakDetectAndExportWorkflow(Run run, PeakDetectAndExportWorkflowParameters parameters)
{
this.WorkflowParameters = parameters;
this.Run = run;
}
