public List <FastQCItem> ReadFromRootDirectory(string rootDirectory)
{
return((from dir in Directory.GetDirectories(rootDirectory)
let item = FastQCItem.ParseFromDirectory(dir)
where item != null
select item).ToList());
}
public static FastQCItem ParseFromDirectory(string directory)
{
FastQCItem result = new FastQCItem();
result.Name = Path.GetFileName(directory);
foreach (var dir in Directory.GetDirectories(directory))
{
var file = dir + "/fastqc_data.txt";
if (File.Exists(file))
{
result.Items.Add(FastQCBasicStatisticItem.ParseFromFile(file));
}
}
if (result.Items.Count == 0)
{
return null;
}
return result;
}
public static FastQCItem ParseFromDirectory(string directory)
{
FastQCItem result = new FastQCItem();
result.Name = Path.GetFileName(directory);
foreach (var dir in Directory.GetDirectories(directory))
{
var file = dir + "/fastqc_data.txt";
if (File.Exists(file))
{
result.Items.Add(FastQCBasicStatisticItem.ParseFromFile(file));
}
}
if (result.Items.Count == 0)
{
return(null);
}
return(result);
}