public void ComparerWorks()
{
if (MiscUtils.IsRunningAnyLinux)
{
return; // currently failing on linux :(
}
IReadOnlyList <IContigInfo> CreateHeader(string fileName) => VcfHeader
.TryCreate(Path.Combine("Resources", "VcfHeaders", fileName).ToFileInfo()).GetOrThrow()
.ColumnMetaInfoLines.ContigLines.Select(kvp => kvp.Value.Contig).ToReadOnlyList();
var comparer = WittyerVcfWriter.CreateComparer(CreateHeader("query.vcf.gz"), CreateHeader("truth.vcf.gz"));
var parser = VcfVariantParserSettings.Create(ImmutableList.Create(SampleName));
var bnd1 = VcfVariant.TryParse(Bnd1, parser).GetOrThrow();
var bnd2 = VcfVariant.TryParse(Bnd2, parser).GetOrThrow();
Assert.True(comparer.Compare(bnd1, bnd2) < 0);
}
