private void buttonChooseStack_Click(object sender, EventArgs e)
{
if (Filenames.Count > 0)
{
Filenames.Clear();
}
openFileDialogStack.Filter = _dialogFilterStack;
openFileDialogStack.InitialDirectory = _initDir;
openFileDialogStack.FileName = "";
DialogResult result = openFileDialogStack.ShowDialog();
if (result == DialogResult.OK)
{
Stackname = openFileDialogStack.FileName;
if (Stackname != null)
{
textBox1.Text = Stackname;
WSIExtraction.Stack stack = ReadWriteUtils.DeserializeObjectFromJSON <WSIExtraction.Stack>(Stackname);
foreach (WSIExtraction.Slice slice in stack.Section)
{
Filenames.Add(Path.Combine(Path.GetDirectoryName(Stackname), slice.Path));
}
}
textBox1.Text = Stackname;
EnableButtons();
}
}
private void WriteStackV2(int threshold)
{
WSIExtraction.Stack stack = new WSIExtraction.Stack();
stack.Stackname = this.textBox1.Text;
stack.Threshold = threshold;
List <int> backgroundColor = new List <int>();
backgroundColor.Add((int)(Math.Round(background_color[0])));
backgroundColor.Add((int)(Math.Round(background_color[1])));
backgroundColor.Add((int)(Math.Round(background_color[2])));
stack.Backgroundcolor = backgroundColor;
stack.Resolutionlevel = (int)this.numericUpDown1.Value;
List <WSIExtraction.Slice> slices = new List <WSIExtraction.Slice>();
foreach (WSIHistoObject obj in objects)
{
WSIExtraction.Slice slice = new WSIExtraction.Slice();
slice.Path = obj.labelTitle.Text + ".png";
slice.WsiSourcePath = obj.wsiImagePath;
slice.X = obj.objRectangle.X;
slice.Y = obj.objRectangle.Y;
slice.Width = obj.objRectangle.Width;
slice.Height = obj.objRectangle.Height;
slices.Add(slice);
}
stack.Section = slices;
ReadWriteUtils.SerializeObjectToJSON(stack, Path.Combine(ApplicationContext.OutputPath, this.textBox1.Text, "stack.json"));
// back to normal cursor
Cursor.Current = Cursors.Default;
MessageBox.Show("Done");
}
