public async Task FindEntityTest()
{
var testNumber = 2;
// Create a test workspace
var workspaceItem = await TestHelper.CreateWorkspaceAsync(_testClassName, testNumber);
// Upload test data
var uploadPath = Path.Combine(TestSettings.TestDataRootDirectory, "Sro", "mr.dcm");
var overrides = new UploadFileOverrides
{
Patient = new PatientOverridesSchema {
Mrn = $"{testNumber}-Mrn", Name = $"{testNumber}-Name"
}
};
var uploadResults = await _proKnow.Uploads.UploadAsync(workspaceItem, uploadPath, overrides);
var uploadProcessingResults = await _proKnow.Uploads.GetUploadProcessingResultsAsync(workspaceItem, uploadResults);
var uploadBatch = new UploadBatch(_proKnow, workspaceItem.Id, uploadProcessingResults.Results);
// Get the summary views of the patient and an entity in the upload response
var uploadPatientSummary = uploadBatch.FindPatient(uploadPath);
var uploadEntitySummary = uploadBatch.FindEntity(uploadPath);
// Verify the contents
Assert.AreEqual(workspaceItem.Id, uploadEntitySummary.WorkspaceId);
Assert.AreEqual(uploadPatientSummary.Id, uploadEntitySummary.PatientId);
Assert.IsNotNull(uploadEntitySummary.Id);
Assert.AreEqual("1.2.246.352.221.470938394496317011513892701464452657827", uploadEntitySummary.Uid);
Assert.AreEqual("image_set", uploadEntitySummary.Type);
Assert.AreEqual("MR", uploadEntitySummary.Modality);
Assert.AreEqual("", uploadEntitySummary.Description);
}
public async Task FindSroTest()
{
var testNumber = 3;
// Create a test workspace
var workspaceItem = await TestHelper.CreateWorkspaceAsync(_testClassName, testNumber);
// Upload test data
var uploadPath = Path.Combine(TestSettings.TestDataRootDirectory, "Sro", "reg.dcm");
var overrides = new UploadFileOverrides
{
Patient = new PatientOverridesSchema {
Mrn = $"{testNumber}-Mrn", Name = $"{testNumber}-Name"
}
};
var uploadResults = await _proKnow.Uploads.UploadAsync(workspaceItem, uploadPath, overrides);
var uploadProcessingResults = await _proKnow.Uploads.GetUploadProcessingResultsAsync(workspaceItem, uploadResults);
var uploadBatch = new UploadBatch(_proKnow, workspaceItem.Id, uploadProcessingResults.Results);
// Get the summary views of the patient and the SRO in the upload response
var uploadPatientSummary = uploadBatch.FindPatient(uploadPath);
var uploadSroSummary = uploadBatch.FindSro(uploadPath);
// Verify the contents
Assert.AreEqual(workspaceItem.Id, uploadSroSummary.WorkspaceId);
Assert.AreEqual(uploadPatientSummary.Id, uploadSroSummary.PatientId);
Assert.IsNotNull(uploadSroSummary.StudyId);
Assert.IsNotNull(uploadSroSummary.Id);
Assert.AreEqual("1.2.246.352.221.52738008096457865345287404867971417272", uploadSroSummary.Uid);
}
public async Task FindPatientTest()
{
var testNumber = 1;
// Create a test workspace
var workspaceItem = await TestHelper.CreateWorkspaceAsync(_testClassName, testNumber);
// Upload test data
var mrUploadPath = Path.Combine(TestSettings.TestDataRootDirectory, "Sro", "mr.dcm");
var sroUploadPath = Path.Combine(TestSettings.TestDataRootDirectory, "Sro", "reg.dcm");
var uploadPaths = new List <String>()
{
mrUploadPath, sroUploadPath
};
var overrides = new UploadFileOverrides
{
Patient = new PatientOverridesSchema {
Mrn = $"{testNumber}-Mrn", Name = $"{testNumber}-Name"
}
};
var uploadResults = await _proKnow.Uploads.UploadAsync(workspaceItem, uploadPaths, overrides);
var uploadProcessingResults = await _proKnow.Uploads.GetUploadProcessingResultsAsync(workspaceItem, uploadResults);
var uploadBatch = new UploadBatch(_proKnow, workspaceItem.Id, uploadProcessingResults.Results);
// Get the summary view of the patient in the upload response
var uploadPatientSummary = uploadBatch.FindPatient(mrUploadPath);
// Verify the contents at the patient level
Assert.AreEqual(workspaceItem.Id, uploadPatientSummary.WorkspaceId);
Assert.IsNotNull(uploadPatientSummary.Id);
Assert.AreEqual(overrides.Patient.Mrn, uploadPatientSummary.Mrn);
Assert.AreEqual(overrides.Patient.Name, uploadPatientSummary.Name);
Assert.AreEqual(1, uploadPatientSummary.Entities.Count);
Assert.AreEqual(1, uploadPatientSummary.Sros.Count);
// Verify the contents at the entity level
var uploadEntitySummary = uploadPatientSummary.Entities[0];
Assert.AreEqual(workspaceItem.Id, uploadEntitySummary.WorkspaceId);
Assert.AreEqual(uploadPatientSummary.Id, uploadEntitySummary.PatientId);
Assert.IsNotNull(uploadEntitySummary.Id);
Assert.AreEqual("1.2.246.352.221.470938394496317011513892701464452657827", uploadEntitySummary.Uid);
Assert.AreEqual("image_set", uploadEntitySummary.Type);
Assert.AreEqual("MR", uploadEntitySummary.Modality);
Assert.AreEqual("", uploadEntitySummary.Description);
// Verify the contents at the SRO level
var uploadSroSummary = uploadPatientSummary.Sros[0];
Assert.AreEqual(workspaceItem.Id, uploadSroSummary.WorkspaceId);
Assert.AreEqual(uploadPatientSummary.Id, uploadSroSummary.PatientId);
Assert.IsNotNull(uploadSroSummary.StudyId);
Assert.IsNotNull(uploadSroSummary.Id);
Assert.AreEqual("1.2.246.352.221.52738008096457865345287404867971417272", uploadSroSummary.Uid);
}
public async Task GetAsyncTest()
{
var testNumber = 1;
// Create a test workspace
var workspaceItem = await TestHelper.CreateWorkspaceAsync(_testClassName, testNumber);
// Upload test data
var uploadPath = Path.Combine(TestSettings.TestDataRootDirectory, "Sro");
var overrides = new UploadFileOverrides
{
Patient = new PatientOverridesSchema {
Mrn = $"{testNumber}-Mrn", Name = $"{testNumber}-Name"
}
};
var uploadResults = await _proKnow.Uploads.UploadAsync(workspaceItem, uploadPath, overrides);
var uploadProcessingResults = await _proKnow.Uploads.GetUploadProcessingResultsAsync(workspaceItem, uploadResults);
var uploadBatch = new UploadBatch(_proKnow, workspaceItem.Id, uploadProcessingResults.Results);
// Get the summary views of the patient, entities, and SRO in the upload response
var uploadPatientSummary = uploadBatch.FindPatient(Path.Combine(uploadPath, "reg.dcm"));
var uploadCtEntitySummary = uploadBatch.FindEntity(Path.Combine(uploadPath, "ct.dcm"));
var uploadMrEntitySummary = uploadBatch.FindEntity(Path.Combine(uploadPath, "mr.dcm"));
var uploadSroSummary = uploadBatch.FindSro(Path.Combine(uploadPath, "reg.dcm"));
// Get the full representation of the patient, entities, and SRO
var ctImageSetItem = await uploadCtEntitySummary.GetAsync();
var mrImageSetItem = await uploadMrEntitySummary.GetAsync();
var sroItem = await uploadSroSummary.GetAsync();
// Verify the contents
Assert.AreEqual(workspaceItem.Id, sroItem.WorkspaceId);
Assert.AreEqual(uploadPatientSummary.Id, sroItem.PatientId);
Assert.AreEqual(ctImageSetItem.StudyId, sroItem.StudyId);
Assert.IsNotNull(sroItem.Id);
Assert.AreEqual("1.2.246.352.221.52738008096457865345287404867971417272", sroItem.Uid);
Assert.AreEqual("2018-02-19 09:06:05", sroItem.Name);
Assert.AreEqual("rigid", sroItem.Type);
Assert.AreEqual(mrImageSetItem.FrameOfReferenceUid, sroItem.Source.FrameOfReferenceUid);
Assert.AreEqual(mrImageSetItem.Id, sroItem.Source.ImageSetId);
Assert.AreEqual(ctImageSetItem.FrameOfReferenceUid, sroItem.Target.FrameOfReferenceUid);
Assert.AreEqual(ctImageSetItem.Id, sroItem.Target.ImageSetId);
}
public async Task GetAsyncTest()
{
var testNumber = 1;
// Create a test workspace
var workspaceItem = await TestHelper.CreateWorkspaceAsync(_testClassName, testNumber);
// Upload test data
var uploadPath = Path.Combine(TestSettings.TestDataRootDirectory, "Sro", "ct.dcm");
var overrides = new UploadFileOverrides
{
Patient = new PatientOverridesSchema {
Mrn = $"{testNumber}-Mrn", Name = $"{testNumber}-Name"
}
};
var uploadResults = await _proKnow.Uploads.UploadAsync(workspaceItem, uploadPath, overrides);
var uploadProcessingResults = await _proKnow.Uploads.GetUploadProcessingResultsAsync(workspaceItem, uploadResults);
var uploadBatch = new UploadBatch(_proKnow, workspaceItem.Id, uploadProcessingResults.Results);
// Get the summary views of the patient and entity in the upload response
var uploadPatientSummary = uploadBatch.FindPatient(uploadPath);
var uploadEntitySummary = uploadBatch.FindEntity(uploadPath);
// Get the full representation of the entity
var imageSetItem = await uploadEntitySummary.GetAsync() as ImageSetItem;
// Verify the contents
Assert.AreEqual(workspaceItem.Id, imageSetItem.WorkspaceId);
Assert.AreEqual(uploadPatientSummary.Id, imageSetItem.PatientId);
Assert.AreEqual("1.2.246.352.221.5093062159960566210763150553104377477", imageSetItem.FrameOfReferenceUid);
Assert.IsNotNull(imageSetItem.Id);
Assert.AreEqual("image_set", imageSetItem.Type);
Assert.AreEqual("1.2.246.352.221.563569281719761951014104635106765053066", imageSetItem.Uid);
Assert.AreEqual("CT", imageSetItem.Modality);
Assert.AreEqual("", imageSetItem.Description);
Assert.IsTrue(imageSetItem.Metadata.Count == 0);
Assert.AreEqual("completed", imageSetItem.Status);
}
public async Task GetAsyncTest()
{
var testNumber = 1;
// Create a test workspace
var workspaceItem = await TestHelper.CreateWorkspaceAsync(_testClassName, testNumber);
// Upload test data
var uploadPath = Path.Combine(TestSettings.TestDataRootDirectory, "Sro", "ct.dcm");
var overrides = new UploadFileOverrides
{
Patient = new PatientOverridesSchema {
Mrn = $"{testNumber}-Mrn", Name = $"{testNumber}-Name"
}
};
var uploadResults = await _proKnow.Uploads.UploadAsync(workspaceItem, uploadPath, overrides);
var uploadProcessingResults = await _proKnow.Uploads.GetUploadProcessingResultsAsync(workspaceItem, uploadResults);
var uploadBatch = new UploadBatch(_proKnow, workspaceItem.Id, uploadProcessingResults.Results);
// Get the summary view of the patient in the upload response
var uploadPatientSummary = uploadBatch.FindPatient(uploadPath);
// Get the full representation of the patient
var patientItem = await uploadPatientSummary.GetAsync();
// Verify the contents
Assert.AreEqual(workspaceItem.Id, patientItem.WorkspaceId);
Assert.IsNotNull(patientItem.Id);
Assert.AreEqual(overrides.Patient.Mrn, patientItem.Mrn);
Assert.AreEqual(overrides.Patient.Name, patientItem.Name);
Assert.AreEqual(1, patientItem.Studies.Count);
Assert.AreEqual(workspaceItem.Id, patientItem.Studies[0].WorkspaceId);
Assert.AreEqual(patientItem.Id, patientItem.Studies[0].PatientId);
Assert.IsNotNull(patientItem.Studies[0].Id);
Assert.AreEqual(1, patientItem.Studies[0].Entities.Count);
Assert.AreEqual(0, patientItem.Studies[0].Sros.Count);
}