/// <summary>
/// Expand each data file in the comparison into the variable mapping
/// and lists of variables and array variables
/// </summary>
/// <param name="comparison"></param>
private VariableMappings mapFiles(TreatmentComparison comparison)
{
// There is no point in mapping if no concentration file was found
if (comparison.ConcentrationFile == null)
{
return(null);
}
// Extract variables for concentration
var extendedConc = this.extractVariables(comparison.ConcentrationFile);
// If no array variables were found in concentration data is useless, return
if (!extendedConc.ArrayVariables.Any())
{
return(null);
}
// Extract variables for pk and time
var extendedPk = this.extractVariables(comparison.PkFile);
var extendedTime = comparison.UseTimeFile ?
this.extractVariables(comparison.TimeFile) : null;
// Compute the list of common variables
var commonVarNames = extendedPk.Variables.Intersect(extendedConc.Variables);
var commonVars = commonVarNames.Select(v => new Variable
{
Name = v,
Values = extendedConc.Data.AsEnumerable()
.Select(r => r[v].ToString()).Distinct().ToList()
});
var mappings = new VariableMappings {
CommonVariables = commonVars.ToList()
};
// Add the array variables
mappings.ArrayVariables = extendedConc.ArrayVariables;
mappings.ArrayVariables.ForEach(v => v.File = "CONC");
if (comparison.UseTimeFile)
{
extendedTime.ArrayVariables.ForEach(v => v.File = "TIME");
mappings.ArrayVariables.AddRange(extendedTime.ArrayVariables);
}
// Map common variables
mappings.CommonVariableMappings = this.mapCommonVariables(mappings);
// Map array variables
mappings.ArrayVariableMappings = this.mapConcentrationVariables(mappings.ArrayVariables);
return(mappings);
}
string getTitleFromPath(TreatmentComparison comparison)
{
var trimmedPath = comparison.PkFile.Path;
trimmedPath.Substring(trimmedPath.IndexOf(@"\m5\") + 4);
var title = "";
do
{
trimmedPath = Path.GetDirectoryName(trimmedPath);
title = Path.GetFileName(trimmedPath);
} while (title != null && nonMeaningfulFolderNames.Contains(title.ToLower()));
return(title);
}
public void Post(string submissionId, string projectName, [FromBody] TreatmentComparison comparison)
{
var generator = new OgdScriptGenerator(submissionId, projectName, comparison);
generator.Create();
var zipFilename = Path.ChangeExtension(generator.OutputFolder, "zip");
if (File.Exists(zipFilename))
{
File.Delete(zipFilename);
}
ZipFile.CreateFromDirectory(generator.OutputFolder, zipFilename);
}
public VariableMappings MapComparison([FromBody] TreatmentComparison comparison)
{
return(this.mapFiles(comparison));
}
