/// <summary>
/// Process the next frame
/// </summary>
/// <param name="frameNumber">The frame index</param>
/// <param name="camImage">The camera image</param>
/// <param name="poi">The fish location</param>
/// <returns>Whether experiment should continue or not</returns>
public override bool ProcessNext(int frameNumber, Image8 camImage, out IppiPoint?poi)
{
base.ProcessNext(frameNumber, camImage, out poi);
if (_scanner == null)
{
System.Diagnostics.Debug.WriteLine("Scanner was not initialized. Terminating experiment");
return(false);
}
int writeEvery = Properties.Settings.Default.FrameRate * 4;
if (frameNumber % writeEvery == writeEvery - 1)
{
_laser.LaserPower = Properties.Settings.Default.LaserCalibPowermW;
}
else
{
_laser.LaserPower = 0;
}
_lastFrame = frameNumber;
if (frameNumber >= _totalFrames)
{
return(false);
}
BlobWithMoments fish = null;
// Every 4s we turn on the laser - those frames won't be tracked but the image will be saved
if (frameNumber % writeEvery != 0)
{
fish = Tracker.Track(camImage);
}
if (fish != null)
{
poi = new IppiPoint(fish.Centroid.x, fish.Centroid.y);
if (_scanner != null)
{
_scanner.Hit(poi.GetValueOrDefault());
}
}
if (_trackWriter != null)
{
if (fish != null)
{
_trackWriter.WriteLine("{0}\t{1}\t{2}\t{3}", frameNumber, fish.Centroid.x, fish.Centroid.y, fish.Angle);
}
else
{
_trackWriter.WriteLine("NaN\tNaN\tNaN\tNaN");
}
// Write image of Laser On frames and the two surrounding frames on each side to file
if (frameNumber % writeEvery <= 2 || frameNumber % writeEvery >= writeEvery - 2)
{
_imageWriter.WriteFrame(camImage);
}
}
return(true);
}
/// <summary>
/// Process the next frame
/// </summary>
/// <param name="frameNumber">The frame index</param>
/// <param name="camImage">The camera image</param>
/// <param name="poi">The fish location</param>
/// <returns>Whether experiment should continue or not</returns>
public override bool ProcessNext(int frameNumber, Image8 camImage, out IppiPoint?poi)
{
base.ProcessNext(frameNumber, camImage, out poi);
_lastFrame = frameNumber;
if (frameNumber >= _totalFrames)
{
return(false);
}
var fish = Tracker.Track(camImage);
if (fish != null)
{
poi = new IppiPoint(fish.Centroid.x, fish.Centroid.y);
}
if (_trackWriter != null)
{
if (fish != null)
{
_trackWriter.WriteLine("{0}\t{1}\t{2}\t{3}", frameNumber, fish.Centroid.x, fish.Centroid.y, fish.Angle);
if (_writeFishImages)
{
//blank and copy
ip.ippiSet_8u_C1R(0, _camRegion.Image, _camRegion.Stride, _camRegion.Size);
MainViewModel.CopyRegionImage(fish.Centroid, _camRegion, camImage);
_imageWriter.WriteFrame(_camRegion);
MainViewModel.CopyRegionImage(fish.Centroid, _camRegion, Tracker.Background);
_backgroundWriter.WriteFrame(_camRegion);
}
}
else
{
_trackWriter.WriteLine("NaN\tNaN\tNaN\tNaN");
if (_writeFishImages)
{
//blank
ip.ippiSet_8u_C1R(0, _camRegion.Image, _camRegion.Stride, _camRegion.Size);
_imageWriter.WriteFrame(_camRegion);
_backgroundWriter.WriteFrame(_camRegion);
}
}
}
return(true);
}
/// <summary>
/// Process the next frame
/// </summary>
/// <param name="frameNumber">The frame index</param>
/// <param name="camImage">The camera image</param>
/// <param name="poi">The fish location</param>
/// <returns>Whether experiment should continue or not</returns>
public override bool ProcessNext(int frameNumber, Image8 camImage, out IppiPoint?poi)
{
base.ProcessNext(frameNumber, camImage, out poi);
_lastFrame = frameNumber;
if (_originalType == OriginalType.Unknown)
{
//This should never happen...
System.Diagnostics.Debug.WriteLine("Unknown original experiment type. Terminating experiment");
return(false);
}
if (_scanner == null)
{
System.Diagnostics.Debug.WriteLine("Scanner was not initialized. Terminating experiment");
return(false);
}
if (_experimentPhase == ExperimentPhase.Done)
{
return(false);
}
BlobWithMoments fish = null;
fish = Tracker.Track(camImage);
if (fish != null)
{
poi = new IppiPoint(fish.Centroid.x, fish.Centroid.y);
try
{
if (_scanner != null)
{
_scanner.Hit(poi.GetValueOrDefault());
}
}
catch (ArgumentOutOfRangeException)
{
System.Diagnostics.Debug.WriteLine("Tried to hit coordinates outside scan table area.");
System.Diagnostics.Debug.WriteLine("Coordinates were: x={0}, y={1}", fish.xc, fish.yc);
System.Diagnostics.Debug.WriteLine("Terminating Experiment");
_laser.LaserPower = 0;
return(false);
}
}
//Get the next data item
string currentData = _originalTrackData.Dequeue();
string[] currentItems = currentData.Split('\t');
int phase, trial;
double power = ProcessTrackItems(currentItems, out phase, out trial);
if (double.IsNaN(power))
{
power = 0;
}
//Write track information
WriteTrackInfo(frameNumber, fish, phase, trial);
//Write images
ip.ippiSet_8u_C1R(0, _camRegion.Image, _camRegion.Stride, _camRegion.Size);
if (fish != null)
{
MainViewModel.CopyRegionImage(fish.Centroid, _camRegion, camImage);
}
_imageWriter.WriteFrame(_camRegion);
if (fish != null)
{
MainViewModel.CopyRegionImage(fish.Centroid, _camRegion, Tracker.Background);
}
_backgroundWriter.WriteFrame(_camRegion);
RunReplay(power);
//If we have lost the fish, disengage the laser
if (fish == null)
{
_laser.LaserPower = 0;
}
return(true);
}
/// <summary>
/// Process the next frame
/// </summary>
/// <param name="frameNumber">The frame index</param>
/// <param name="camImage">The camera image</param>
/// <param name="poi">The fish location</param>
/// <returns>Whether experiment should continue or not</returns>
public override bool ProcessNext(int frameNumber, Image8 camImage, out IppiPoint?poi)
{
base.ProcessNext(frameNumber, camImage, out poi);
_lastFrame++;
if (_scanner == null)
{
System.Diagnostics.Debug.WriteLine("Scanner was not initialized. Terminating experiment");
return(false);
}
if (_experimentPhase == ExperimentPhase.Done)
{
return(false);
}
BlobWithMoments fish = null;
fish = Tracker.Track(camImage);
if (fish != null)
{
poi = new IppiPoint(fish.Centroid.x, fish.Centroid.y);
try
{
if (_scanner != null)
{
_scanner.Hit(poi.GetValueOrDefault());
}
}
catch (ArgumentOutOfRangeException)
{
System.Diagnostics.Debug.WriteLine("Tried to hit coordinates outside scan table area.");
System.Diagnostics.Debug.WriteLine("Coordinates were: x={0}, y={1}", fish.xc, fish.yc);
System.Diagnostics.Debug.WriteLine("Terminating Experiment");
_laser.LaserPower = 0;
return(false);
}
}
//Write track information including current phase, current laser power
WriteTrackInfo(frameNumber, fish);
//Write images
ip.ippiSet_8u_C1R(0, _camRegion.Image, _camRegion.Stride, _camRegion.Size);
if (fish != null)
{
MainViewModel.CopyRegionImage(fish.Centroid, _camRegion, camImage);
}
_imageWriter.WriteFrame(_camRegion);
if (fish != null)
{
MainViewModel.CopyRegionImage(fish.Centroid, _camRegion, Tracker.Background);
}
_backgroundWriter.WriteFrame(_camRegion);
//Depending on phase call process method to control laser power and switch phase if appropriate
switch (_experimentPhase)
{
case ExperimentPhase.Habituation:
RunHabituation();
break;
case ExperimentPhase.Pre:
RunPrePhase();
break;
case ExperimentPhase.Gradient:
RunGradient(fish);
break;
}
//If we have lost the fish, disengage the laser
if (fish == null)
{
_laser.LaserPower = 0;
}
return(true);
}