private void AddSpecimensToCollection(int colId, string specimenIds, bool isNewCollection)
{
if (!string.IsNullOrEmpty(specimenIds))
{
char[] delimiters = { ',' };
string[] ids = specimenIds.Split(new char[] { ',' });
this.numOfSpecimensAdded = ids.GetLength(0);
//get each specimen by id and set its collectionId
foreach (string sId in ids)
{
Specimen biz = new Specimen();
Specimen_SpecimenCollections bizcol = new Specimen_SpecimenCollections();
biz.Get(int.Parse(sId));
//biz[Specimen.CollectionId] = colId;
//biz[Specimen.SpecimenStatus] = "Unavailable: Reserved"; //bug fix
//biz.Save();
if (!SpecimenCollectionExists(int.Parse(sId), colId))
{
bizcol[Specimen_SpecimenCollections.SpecimenId] = sId;
bizcol[Specimen_SpecimenCollections.CollectionId] = colId;
bizcol.Save();
}
BindSpecimensGrid();
}
LoadExistingCollection(colId, isNewCollection);
}
}
protected Boolean SpecimenCollectionExists(int specimenId, int collectionId)
{
System.Collections.Generic.Dictionary <string, object> check = new System.Collections.Generic.Dictionary <string, object>();
check.Add(Specimen_SpecimenCollections.SpecimenId, specimenId);
check.Add(Specimen_SpecimenCollections.CollectionId, collectionId);
bool exists = Specimen_SpecimenCollections.GetByFields <Specimen_SpecimenCollections>(check).Count() > 0;
return(exists);
}
protected void RemoveFromCollection(object sender, CommandEventArgs e)
{
int priKey = int.Parse(e.CommandArgument.ToString());
Specimen biz = new Specimen();
biz.Get(priKey);
//biz[Specimen.CollectionId] = DBNull.Value;
//biz[Specimen.SpecimenStatus] = "Available";
//biz.Save();
SpecimenManagerDa da = new SpecimenManagerDa();
int specColId = da.GetPrimKeybySpecId(priKey);
Specimen_SpecimenCollections bizcol = new Specimen_SpecimenCollections();
bizcol.Delete(specColId);
BindSpecimensGrid();
}
/// <summary>
/// Special logic for removing specimen and rolling back the status
/// </summary>
/// <param name="specimenCollectionId"></param>
private void RemoveSpecimenFromCollection(int specimenCollectionId)
{
Specimen_SpecimenCollections biz = new Specimen_SpecimenCollections();
biz.Get(specimenCollectionId);
if (!biz.IsEmpty)
{
int specimenId = (int)biz[Specimen_SpecimenCollections.SpecimenId];
Specimen specimen = new Specimen();
specimen.Get(specimenId);
string currentStatus = specimen[Specimen.SpecimenStatus].ToString();
string rollbackStatus = "";
switch (currentStatus)
{
case "In Transit to Pathology":
rollbackStatus = "Collected";
break;
case "In Transit to Sequencing":
rollbackStatus = "Pathology Review Completed";
break;
case "In Transit to Analysis":
rollbackStatus = "Sequenced";
break;
case "In Transit to cBIO Portal":
rollbackStatus = "Analysis Complete";
break;
default:
break;
}
// rollback status
if (!string.IsNullOrEmpty(currentStatus) && !string.IsNullOrEmpty(rollbackStatus))
{
specimen[Specimen.SpecimenStatus] = rollbackStatus;
specimen.Save();
}
biz.Delete(specimenCollectionId);
}
}
/// <summary>
///
/// </summary>
/// <param name="collectionId"></param>
/// <returns></returns>
private IEnumerable <int> SaveSpecimens(int collectionId)
{
List <int> specimensInCollection = new List <int>();
foreach (GridViewRow row in SpecimensGrid.Rows)
{
int specimenId = (int)SpecimensGrid.DataKeys[row.RowIndex][Specimen.SpecimenId];
string specimenCollectionId = SpecimensGrid.DataKeys[row.RowIndex][Specimen_SpecimenCollections.SpecimenCollectionId] + "";
CheckBox cb = row.FindControl("IncludeSpecimenCheck") as CheckBox;
// add new
if (cb.Checked && string.IsNullOrEmpty(specimenCollectionId))
{
Specimen_SpecimenCollections newSpecimenCollection = new Specimen_SpecimenCollections();
newSpecimenCollection[Specimen_SpecimenCollections.SpecimenId] = specimenId;
newSpecimenCollection[Specimen_SpecimenCollections.CollectionId] = collectionId;
newSpecimenCollection.Save();
// add entry
specimensInCollection.Add(specimenId);
}
// remove existing
else if (!string.IsNullOrEmpty(specimenCollectionId))
{
if (!cb.Checked)
{
int priKey = int.Parse(specimenCollectionId);
RemoveSpecimenFromCollection(priKey);
}
else
{
// add entry
specimensInCollection.Add(specimenId);
}
}
}
return(specimensInCollection);
}