private List <TaxonomicClassification> GetBestMatchingTaxonomies(SpeciesInfo candidate, List <TaxonomicClassification> localTaxonomies)
{
var speciesMatches = GetAllMatchesForSpecies(candidate, localTaxonomies);
if (speciesMatches.Count > 0)
{
return(speciesMatches);
}
if (candidate.GetName().ToLower() == "human")
{
return(new List <TaxonomicClassification>());
//TODO: hack to prevent overzealous matching for humans. Need to figure out a better way...
}
var genusMatches = GetAllMatchesForGenus(candidate, localTaxonomies);
if (genusMatches.Count > 0)
{
return(genusMatches);
}
var familyMatches = GetAllMatchesForFamily(candidate, localTaxonomies);
if (familyMatches.Count > 0)
{
return(familyMatches);
}
return(new List <TaxonomicClassification>());
}
private Double GetMinProbability(SpeciesInfo speciesInfo)
{
var key = speciesInfo.GetName().ToLower();
return(ProbabilityMins.ContainsKey(key) ? ProbabilityMins[key] : ProbabilityMins["default"]);
}