public void TestReadWrite()
{
var ann = new IdentifiedProtein();
var pqr = new ProteinQuantificationResult();
pqr.Items["D1"] = new QuantificationItem()
{
Enabled = true,
Ratio = 1.5,
SampleIntensity = 150,
ReferenceIntensity = 100,
Correlation = 0.9,
ScanCount = 55,
Filename = "test1.silac"
};
pqr.Items["D2"] = new QuantificationItem()
{
Enabled = false,
Ratio = 3,
SampleIntensity = 250,
ReferenceIntensity = 200,
Correlation = 0.8,
ScanCount = 77,
Filename = "test2.silac"
};
ann.Annotations[SilacQuantificationConstants.SILAC_KEY] = pqr;
var converter = new SilacProteinQuantificationResultConverter2 <IAnnotation>();
List <IPropertyConverter <IAnnotation> > converters = new List <IPropertyConverter <IAnnotation> >();
converters.Add(converter);
converters.AddRange(converter.GetRelativeConverter(new IAnnotation[] { ann }.ToList()));
CompositePropertyConverter <IAnnotation> finalConverter = new CompositePropertyConverter <IAnnotation>(converters, ',');
Assert.AreEqual("S_COUNT,SE_D1,SR_D1,SRC_D1,SSI_D1,SRI_D1,SE_D2,SR_D2,SRC_D2,SSI_D2,SRI_D2", finalConverter.Name);
var line1 = finalConverter.GetProperty(ann);
Assert.AreEqual("2,True,1.5000,0.9000,150.0,100.0,False,3.0000,0.8000,250.0,200.0", line1);
var protein2 = new IdentifiedProtein();
var finalC = IdentifiedProteinPropertyConverterFactory.GetInstance().GetConverters(finalConverter.Name, ',');
finalC.SetProperty(protein2, line1);
var line2 = finalConverter.GetProperty(protein2);
Assert.AreEqual(line1, line2);
}
public void TestReadWrite()
{
var ann = new IdentifiedProtein();
var pqr = new ProteinQuantificationResult();
pqr.Items["D1"] = new QuantificationItem()
{
Enabled = true,
Ratio = 1.5,
SampleIntensity = 150,
ReferenceIntensity = 100,
Correlation = 0.9,
ScanCount = 55,
Filename = "test1.silac"
};
pqr.Items["D2"] = new QuantificationItem()
{
Enabled = false,
Ratio = 3,
SampleIntensity = 250,
ReferenceIntensity = 200,
Correlation = 0.8,
ScanCount = 77,
Filename = "test2.silac"
};
ann.Annotations[SilacQuantificationConstants.SILAC_KEY] = pqr;
var converter = new SilacProteinQuantificationResultConverter2<IAnnotation>();
List<IPropertyConverter<IAnnotation>> converters = new List<IPropertyConverter<IAnnotation>>();
converters.Add(converter);
converters.AddRange(converter.GetRelativeConverter(new IAnnotation[] { ann }.ToList()));
CompositePropertyConverter<IAnnotation> finalConverter = new CompositePropertyConverter<IAnnotation>(converters, ',');
Assert.AreEqual("S_COUNT,SE_D1,SR_D1,SRC_D1,SSI_D1,SRI_D1,SE_D2,SR_D2,SRC_D2,SSI_D2,SRI_D2", finalConverter.Name);
var line1 = finalConverter.GetProperty(ann);
Assert.AreEqual("2,True,1.5000,0.9000,150.0,100.0,False,3.0000,0.8000,250.0,200.0", line1);
var protein2 = new IdentifiedProtein();
var finalC = IdentifiedProteinPropertyConverterFactory.GetInstance().GetConverters(finalConverter.Name, ',');
finalC.SetProperty(protein2, line1);
var line2 = finalConverter.GetProperty(protein2);
Assert.AreEqual(line1, line2);
}
