public override int GetHashCode()
{
unchecked
{
var hash = (int)2166136261;
hash = (hash * 16777619) ^ SequenceCoverage.GetHashCode();
hash = (hash * 16777619) ^ FileId.GetHashCode();
return((hash * 16777619) ^ (CoveredLines != null ? CoveredLines.GetHashCode() : 0));
}
}
public string ToOutputLine(OutputFileType type)
{
StringBuilder sb = new StringBuilder(512);
switch (type)
{
case OutputFileType.Parsimony_Proteins:
sb.Append(Name);
sb.Append(',');
sb.Append(IsDecoy);
sb.Append(',');
sb.Append("\"" + Description + "\"");
sb.Append(',');
sb.Append(LongestProteinLen);
sb.Append(',');
sb.Append(SequenceCoverage.ToString("g4"));
sb.Append(',');
sb.Append(SequenceRedundacy.ToString("g4"));
sb.Append(',');
sb.Append(Count);
sb.Append(',');
sb.Append(Count); // Number of unique proteins... need to figure this one out at some point
sb.Append(',');
sb.Append(UniquePeptides);
sb.Append(',');
sb.Append(Peptides.Count);
sb.Append(',');
sb.AppendLine(PScore.ToString(CultureInfo.InvariantCulture));
sb.Append(',');
break;
case OutputFileType.Parsimony_Protein_Groups:
sb.Append(Name);
sb.Append(',');
sb.Append("\"" + Description + "\"");
sb.Append(',');
sb.Append(Count);
sb.Append(',');
sb.Append(Count);
sb.Append(',');
sb.Append(UniquePeptides);
sb.Append(',');
sb.Append(Peptides.Count);
sb.Append(',');
sb.Append(PScore);
sb.AppendLine();
sb.Append(GetProteinStrings());
sb.Append(GetPeptideString());
break;
}
return(sb.ToString());
}
