/// <summary>
/// Gets all registered aligners in core folder and addins (optional) folders
/// </summary>
/// <returns>List of registered aligners</returns>
private static IEnumerable <ISequenceAligner> GetAligners()
{
IList <ISequenceAligner> registeredAligners = new List <ISequenceAligner>();
IList <ISequenceAligner> addInAligners = RegisteredAddIn.GetComposedInstancesFromAssemblyPath <ISequenceAligner>(
"NetBioSequenceAlignersExport", RegisteredAddIn.AddinFolderPath, RegisteredAddIn.DLLFilter);
if (null != addInAligners && addInAligners.Count > 0)
{
foreach (ISequenceAligner aligner in addInAligners.Where(
aligner => aligner != null && registeredAligners.All(sa => string.Compare(sa.Name, aligner.Name, StringComparison.OrdinalIgnoreCase) != 0)))
{
registeredAligners.Add(aligner);
}
}
return(registeredAligners);
}
/// <summary>
/// Gets all registered alphabets in core folder and addins (optional) folders.
/// </summary>
/// <returns>List of registered alphabets.</returns>
private static IList <IAlphabet> GetAlphabets()
{
IList <IAlphabet> registeredAlphabets = new List <IAlphabet>();
IList <IAlphabet> addInAlphabets = RegisteredAddIn.GetComposedInstancesFromAssemblyPath <IAlphabet>(
"NetBioAlphabetsExport", RegisteredAddIn.AddinFolderPath, RegisteredAddIn.DLLFilter);
if (null != addInAlphabets)
{
foreach (IAlphabet alphabet in addInAlphabets.Where(
alphabet => alphabet != null && !registeredAlphabets.Any(
ra => String.Compare(ra.Name, alphabet.Name, StringComparison.OrdinalIgnoreCase) == 0)))
{
registeredAlphabets.Add(alphabet);
}
}
return(registeredAlphabets);
}
